Glomeromycota: Cluster 138

Number of sequences (GIs)5
Number of distinct taxon IDs (TIs)5
Shortest sequence273 nt -- Glomus mosseae partial mRNA for Ste12-like transcription factor (ste12 gene), isolate BEG12.
Longest sequence275 nt -- Acaulospora laevis partial mRNA for Ste12-like transcription factor (ste12 gene), isolate BEG13.
Maximum alignment density1 0.999
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Acaulospora laevis 205275121 78545 275 Acaulospora laevis partial mRNA for Ste12-like transcription factor (ste12 gene), isolate BEG13.
Gigaspora margarita 205275117 4874 275 Gigaspora margarita partial mRNA for Ste12-like transcription factor (ste12 gene), isolate BEG34.
Glomus claroideum 205275115 58152 275 Glomus claroideum partial mRNA for Ste12-like transcription factor (ste12 gene), isolate BEG31.
Glomus mosseae 205275109 27381 273 Glomus mosseae partial mRNA for Ste12-like transcription factor (ste12 gene), isolate BEG12.
Glomus versiforme 205275119 43425 275 Glomus versiforme partial mRNA for Ste12-like transcription factor (ste12 gene), isolate BEG47.


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