Glomeromycota: Cluster 15

Number of sequences (GIs)33
Number of distinct taxon IDs (TIs)11
Shortest sequence802 nt -- Acaulospora laevis clone TUBA2 beta tubulin mRNA, partial cds.
Longest sequence1099 nt -- Glomus intraradices beta tubulin (BTub2) gene, partial cds.
Maximum alignment density1 0.810
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Acaulospora laevis 6424952 78545 802 Acaulospora laevis clone TUBA2 beta tubulin mRNA, partial cds.
Acaulospora laevis 6424954 78545 802 Acaulospora laevis clone TUBA4 beta tubulin mRNA, partial cds.
Acaulospora laevis 52626605 78545 858 Acaulospora laevis partial btub gene for beta tubulin, exons 1-3.
Gigaspora margarita 52626601 4874 862 Gigaspora margarita partial btub gene for beta tubulin, exons 1-3.
Gigaspora margarita 20429151 4874 802 Gigaspora margarita partial mRNA for putative beta-tubulin (btub2a gene).
Gigaspora margarita 20429153 4874 802 Gigaspora margarita partial mRNA for putative beta-tubulin (btub2b gene).
Gigaspora rosea 1845220 44941 802 Gigaspora rosea beta-tubulin gene, partial cds.
Gigaspora rosea 6424950 44941 802 Gigaspora rosea clone TUBgr4 beta tubulin mRNA, partial cds.
Gigaspora rosea 6424948 44941 802 Gigaspora rosea beta tubulin mRNA, partial cds.
Glomus claroideum 52626591 58152 1091 Glomus claroideum partial btub gene for beta tubulin, exons 1-3.
Glomus claroideum 52626589 58152 1010 Glomus claroideum partial btub gene for beta tubulin, exons 1-3.
Glomus clarum 6424958 94130 802 Glomus clarum clone TUB31 beta tubulin mRNA, partial cds.
Glomus clarum 6424956 94130 802 Glomus clarum clone TUB29 beta tubulin mRNA, partial cds.
Glomus clarum 224579279 94130 895 Glomus clarum clone 3 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus clarum 224579283 94130 904 Glomus clarum clone 1 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus clarum 224579281 94130 904 Glomus clarum clone 4 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus clarum 224579285 94130 904 Glomus clarum clone 5 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus clarum 224579287 94130 903 Glomus clarum clone 6 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus clarum 224579275 94130 850 Glomus clarum clone 7 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus clarum 224579273 94130 850 Glomus clarum clone 2 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus clarum 224579277 94130 850 Glomus clarum clone 8 beta-tubulin (btub) gene, exons 1 through 3 and partial cds.
Glomus diaphanum 52626587 118614 1072 Glomus diaphanum partial btub gene for beta tubulin, exons 1-3.
Glomus diaphanum 52626585 118614 1039 Glomus diaphanum partial btub gene for beta tubulin, exons 1-3.
Glomus intraradices 32816014 4876 1099 Glomus intraradices beta tubulin (BTub2) gene, partial cds.
Glomus intraradices 32816012 4876 1078 Glomus intraradices beta tubulin (BTub1) gene, partial cds.
Glomus mosseae 5524660 27381 802 Glomus mosseae beta-tubulin mRNA, partial cds.
Glomus mosseae 6424946 27381 802 Glomus mosseae beta tubulin mRNA, partial cds.
Glomus proliferum 52626595 119559 1055 Glomus proliferum partial btub gene for beta tubulin, exons 1-3.
Glomus proliferum 52626593 119559 1014 Glomus proliferum partial btub gene for beta tubulin, exons 1-3.
Glomus sp. BEG19 52626599 294373 841 Glomus sp. BEG19 partial btub gene for beta tubulin, exons 1-3.
Scutellospora castanea 6424972 42194 802 Scutellospora castanea clone TUBS14 beta tubulin mRNA, partial cds.
Scutellospora castanea 6424970 42194 802 Scutellospora castanea clone TUBS5 beta tubulin mRNA, partial cds.
Scutellospora castanea 52626603 42194 864 Scutellospora castanea partial btub gene for beta tubulin, exons 1-3.


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