Glomeromycota: Cluster 152

Number of sequences (GIs)7
Number of distinct taxon IDs (TIs)6
Shortest sequence657 nt -- Entrophospora schenckii isolate CL401 25S ribosomal RNA gene, partial sequence.
Longest sequence674 nt -- Glomus sp. HM-CL5 partial LSU gene for large ribosomal subunit.
Maximum alignment density1 0.981
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Archaeospora trappei 242120374 77678 659 Archaeospora trappei isolate IL203B 25S ribosomal RNA gene, partial sequence.
Entrophospora schenckii 242120296 445457 657 Entrophospora schenckii isolate CL401 25S ribosomal RNA gene, partial sequence.
Glomus sp. HM-CL5 19744099 117783 674 Glomus sp. HM-CL5 partial LSU gene for large ribosomal subunit.
Paraglomus brasilianum 242120369 144538 657 Paraglomus brasilianum isolate WV215 25S ribosomal RNA gene, partial sequence.
Paraglomus occultum 6977851 144539 667 Glomus occultum partial LSU rRNA gene.
Paraglomus occultum 242120370 144539 657 Paraglomus occultum isolate CR402 25S ribosomal RNA gene, partial sequence.
Paraglomus sp. NI116B 242120371 651977 657 Paraglomus sp. NI116B 25S ribosomal RNA gene, partial sequence.


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