Glomeromycota: Cluster 16

Number of sequences (GIs)28
Number of distinct taxon IDs (TIs)11
Shortest sequence715 nt -- Glomus intraradices H+ ATPase (HA6) gene, partial cds.
Longest sequence2754 nt -- Glomus mosseae H(+)-ATPase (HA5) mRNA, complete cds.
Maximum alignment density1 0.484
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Glomus aggregatum 254212274 241619 750 Glomus aggregatum strain DAOM 240163 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus cerebriforme 254212276 658196 1468 Glomus cerebriforme strain DAOM 227022 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus claroideum 254212286 58152 1474 Glomus claroideum strain DAOM 235359 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus clarum 254212278 94130 1468 Glomus clarum strain DAOM 234281 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus custos 254212288 658200 1468 Glomus custos strain DAOM 236361 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus diaphanum 254212272 118614 1468 Glomus diaphanum strain DAOM 229456 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus intraradices 32816026 4876 715 Glomus intraradices H+ ATPase (HA6) gene, partial cds.
Glomus intraradices 32816030 4876 715 Glomus intraradices H+ ATPase (HA8) gene, partial cds.
Glomus intraradices 32816028 4876 715 Glomus intraradices H+ ATPase (HA7) gene, partial cds.
Glomus intraradices 32816024 4876 715 Glomus intraradices H+ ATPase (HA5) gene, partial cds.
Glomus intraradices 254733411 4876 1468 Glomus intraradices strain DAOM 225240 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus intraradices 32816020 4876 1277 Glomus intraradices H+ ATPase (HA3) gene, partial cds.
Glomus intraradices 16306438 4876 1561 Glomus intraradices plasma membrane proton ATPase (HA5) mRNA, partial cds.
Glomus intraradices 32816022 4876 1294 Glomus intraradices H+ ATPase (HA4) gene, partial cds.
Glomus intraradices 32816016 4876 1294 Glomus intraradices H+ ATPase (HA1) gene, partial cds.
Glomus intraradices 32816018 4876 1294 Glomus intraradices H+ ATPase (HA2) gene, partial cds.
Glomus irregulare 254212266 588596 1468 Glomus irregulare strain DAOM 229457 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus irregulare 262527461 588596 1468 Glomus irregulare strain DAOM 240477 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus irregulare 254212262 588596 1468 Glomus irregulare strain DAOM 234180 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus irregulare 254212264 588596 1468 Glomus irregulare strain DAOM 240201 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus irregulare 254212270 588596 1468 Glomus irregulare strain DAOM 234181 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus mosseae 33391747 27381 2754 Glomus mosseae H(+)-ATPase (HA5) mRNA, complete cds.
Glomus mosseae 7327897 27381 771 Glomus mosseae partial ha5 gene for H+-ATPase.
Glomus mosseae 254212292 27381 1468 Glomus mosseae strain DAOM 240162 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus mosseae 254212294 27381 1468 Glomus mosseae strain DAOM 220901 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus mosseae 254212296 27381 1468 Glomus mosseae strain DAOM 240255 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus multiforum 254212282 658197 1468 Glomus multiforum strain DAOM 240256 V-type H+ ATPase (VHA5) gene, partial cds.
Glomus proliferum 254212280 119559 1468 Glomus proliferum strain DAOM 226389 V-type H+ ATPase (VHA5) gene, partial cds.


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