Glomeromycota: Cluster 179

Number of sequences (GIs)22
Number of distinct taxon IDs (TIs)5
Shortest sequence451 nt -- Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1051/2.
Longest sequence557 nt -- Acaulospora morrowiae 18S rRNA gene (partial), 5.8S rRNA gene, ITS1 and ITS2, clone YL1 YNP Spore AHQ-06.
Maximum alignment density1 0.940
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Acaulospora denticulata 6093117 94115 497 Acaulospora denticulata 18S rRNA (partial), 5.8S rRNA and 28S rRNA (partial) genes and internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2).
Acaulospora mellea 6093118 94116 472 Acaulospora mellea 18S rRNA (partial), 5.8S rRNA and 28S rRNA (partial) genes and internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2).
Acaulospora morrowiae 210971824 94023 557 Acaulospora morrowiae 18S rRNA gene (partial), 5.8S rRNA gene, ITS1 and ITS2, clone YL1 YNP Spore AHQ-06.
Acaulospora morrowiae 6686775 94023 461 Acaulospora morrowiae 18S rRNA (partial), 5.8S rRNA and 28S rRNA (partial) genes and internal transcribed spacers 1 and 2 (ITS1, ITS2), isolate BR226.
Acaulospora paulinae 90185973 282667 535 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, clone 1054/84.
Acaulospora paulinae 90185970 282667 525 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, clone 1052/1.
Acaulospora paulinae 90185975 282667 535 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, clone 1054/2.
Acaulospora paulinae 90185971 282667 548 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, clone 1052/3.
Acaulospora paulinae 90185969 282667 549 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1052/62.
Acaulospora paulinae 90185972 282667 532 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, clone 1052/4.
Acaulospora paulinae 90185976 282667 539 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, clone 1054/3.
Acaulospora paulinae 90185974 282667 536 Acaulospora paulinae partial 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, clone 1054/1.
Acaulospora sp. ZS2005 112806736 342598 541 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1051/3.
Acaulospora sp. ZS2005 112806737 342598 526 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1053/72.
Acaulospora sp. ZS2005 112806735 342598 451 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1051/2.
Acaulospora sp. ZS2005 112806738 342598 555 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1053/3.
Acaulospora sp. ZS2005 112806733 342598 534 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1051/4.
Acaulospora sp. ZS2005 112806731 342598 528 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1049/32.
Acaulospora sp. ZS2005 112806732 342598 532 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1050/44.
Acaulospora sp. ZS2005 112806734 342598 526 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1051/1.
Acaulospora sp. ZS2005 112806739 342598 508 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1053/4.
Acaulospora sp. ZS2005 112806740 342598 536 Acaulospora sp. ZS2005 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and ITS2, clone 1053/5.


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