Glomeromycota: Cluster 26

Number of sequences (GIs)31
Number of distinct taxon IDs (TIs)17
Shortest sequence438 nt -- Acaulospora laevis partial ef1-alpha gene for translation elongation factor, isolate UY991.5.3.2_spore2.
Longest sequence1517 nt -- Scutellospora heterogama isolate AFTOL-ID 138 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Maximum alignment density1 0.515
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Acaulospora laevis 37652178 78545 438 Acaulospora laevis partial ef1-alpha gene for translation elongation factor, isolate UY991.5.3.2_spore2.
Acaulospora laevis 37652180 78545 438 Acaulospora laevis partial ef1-alpha gene for translation elongation factor, isolate UY991.5.3.2_spore3.
Geosiphon pyriformis 116874719 50956 1237 Geosiphon pyriformis partial ef1a gene for ef1a elongation factor, clone pWD_EP1+pWD_EP2B.
Gigaspora margarita 37653268 4874 438 Gigaspora margarita partial ef1-alpha gene for translation elongation factor, isolate UY278.9_spore1 clone 36.
Gigaspora margarita 37653264 4874 438 Gigaspora margarita partial ef1-alpha gene for translation elongation factor, isolate UY278.9_spore1.
Gigaspora margarita 37653266 4874 438 Gigaspora margarita partial ef1-alpha gene for translation elongation factor, isolate UY278.9_spore2.
Glomus aggregatum 254212254 241619 768 Glomus aggregatum strain DAOM 240163 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus cerebriforme 254212240 658196 826 Glomus cerebriforme strain DAOM 227022 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus claroideum 254212242 58152 823 Glomus claroideum strain DAOM 235359 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus clarum 254212238 94130 826 Glomus clarum strain DAOM 234281 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus custos 254212246 658200 826 Glomus custos strain DAOM 236631 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus diaphanum 254212236 118614 826 Glomus diaphanum strain DAOM 229456 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus intraradices 254733409 4876 765 Glomus intraradices strain DAOM 225240 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus intraradices 82792159 4876 1005 Glomus intraradices isolate AFTOL-ID 845 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus irregulare 262527459 588596 800 Glomus irregulare strain DAOM 240477 elongation factor EF1-alpha (EF1-alpha) gene, partial cds.
Glomus irregulare 254212224 588596 826 Glomus irregulare strain DAOM 240201 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus irregulare 254212226 588596 826 Glomus irregulare strain DAOM 234181 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus irregulare 254212232 588596 826 Glomus irregulare strain DAOM 234180 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus irregulare 254212230 588596 826 Glomus irregulare strain DAOM 240159 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus irregulare 254212234 588596 826 Glomus irregulare strain DAOM 229457 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus mosseae 254212260 27381 823 Glomus mosseae strain DAOM 220901 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus mosseae 254212256 27381 823 Glomus mosseae strain DAOM 240162 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus mosseae 254212258 27381 823 Glomus mosseae strain DAOM 240255 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus mosseae 82792163 27381 1170 Glomus mosseae isolate AFTOL-ID 139 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus multiforum 254212248 658197 823 Glomus multiforum strain DAOM 240256 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Glomus proliferum 254212244 119559 765 Glomus proliferum strain DAOM 226389 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Paraglomus occultum 82792165 144539 1123 Paraglomus occultum isolate AFTOL-ID 844 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
Scutellospora dipurpurescens 37653252 78547 438 Scutellospora dipurpurescens partial ef1-alpha gene for translation elongation factor, isolate UY1206.1.6_spore4.
Scutellospora dipurpurescens 37653254 78547 438 Scutellospora dipurpurescens partial ef1-alpha gene for translation elongation factor, isolate UY1206.1.6_spore6.
Scutellospora dipurpurescens 37653256 78547 438 Scutellospora dipurpurescens partial ef1-alpha gene for translation elongation factor, isolate UY1206.1.6_spore11.
Scutellospora heterogama 82792161 43246 1517 Scutellospora heterogama isolate AFTOL-ID 138 elongation factor 1-alpha (EF1-alpha) gene, partial cds.


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