Glomeromycota: Cluster 38

Number of sequences (GIs)12
Number of distinct taxon IDs (TIs)6
Shortest sequence617 nt -- Acaulospora scrobiculata strain BR984-4 isolate AsCHS2 chitin synthase (CHS) gene, partial cds.
Longest sequence621 nt -- Gigaspora margarita strain JA201A isolate GimCHS4 chitin synthase (CHS) gene, partial cds.
Maximum alignment density1 0.995
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Acaulospora scrobiculata 13324464 78546 617 Acaulospora scrobiculata strain BR984-4 isolate AsCHS2 chitin synthase (CHS) gene, partial cds.
Entrophospora colombiana 13324474 27376 617 Entrophospora colombiana strain CL356-6 isolate EcoCHS2 chitin synthase (CHS) gene, partial cds.
Gigaspora margarita 13324454 4874 621 Gigaspora margarita strain JA201A isolate GimCHS4 chitin synthase (CHS) gene, partial cds.
Gigaspora margarita 13324456 4874 617 Gigaspora margarita strain NC114B isolate GimCHS5 chitin synthase (CHS) gene, partial cds.
Glomus intraradices 13324468 4876 617 Glomus intraradices strain IRBV isolate GiCHS2 chitin synthase (CHS) gene, partial cds.
Glomus intraradices 13324462 4876 617 Glomus intraradices strain VTT26-8 isolate GiVCHS2 chitin synthase (CHS) gene, partial cds.
Glomus intraradices 13324466 4876 617 Glomus intraradices strain BR846 isolate GiBCHS2 chitin synthase (CHS) gene, partial cds.
Glomus intraradices 13324460 4876 617 Glomus intraradices strain WV230-1 isolate GiWCHS2 chitin synthase (CHS) gene, partial cds.
Glomus mosseae 13324470 27381 617 Glomus mosseae strain UK127 isolate GmCHS2 chitin synthase (CHS) gene, partial cds.
Glomus mosseae 13324458 27381 617 Glomus mosseae strain WY108 isolate GmWCHS2 chitin synthase (CHS) gene, partial cds.
Scutellospora calospora 6572478 85575 621 Scutellospora calospora chitin synthase (CHS) gene, partial cds.
Scutellospora calospora 13324472 85575 617 Scutellospora calospora strain NY348-5 isolate ScCHS2 chitin synthase (CHS) gene, partial cds.


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