Plasmodium (Vinckeia): Cluster 11 (up to parent cluster)

Number of sequences (GIs)5
Number of distinct taxon IDs (TIs)5
Shortest sequence186 nt -- Plasmodium atheruri strain R20 adenylosuccinate lyase (asl) gene, partial cds.
Longest sequence206 nt -- Plasmodium berghei strain R2 adenylosuccinate lyase (asl) gene, partial cds.
Maximum alignment density1 0.979
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium atheruri 169117168 160486 186 Plasmodium atheruri strain R20 adenylosuccinate lyase (asl) gene, partial cds.
Plasmodium berghei 169117170 5821 206 Plasmodium berghei strain R2 adenylosuccinate lyase (asl) gene, partial cds.
Plasmodium chabaudi 169117166 5825 206 Plasmodium chabaudi strain R16 adenylosuccinate lyase (asl) gene, partial cds.
Plasmodium vinckei 169117164 5860 206 Plasmodium vinckei strain R8 adenylosuccinate lyase (asl) gene, partial cds.
Plasmodium yoelii 169117162 5861 204 Plasmodium yoelii strain R3 adenylosuccinate lyase (asl) gene, partial cds.


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