Plasmodium (Vinckeia): Cluster 18 (up to parent cluster)

Number of sequences (GIs)25
Number of distinct taxon IDs (TIs)5
Shortest sequence234 nt -- Plasmodium berghei merozoite surface protein 1 gene, partial cds.
Longest sequence410 nt -- Plasmodium yoelii merozoite surface protein-1 gene, partial cds.
Maximum alignment density1 0.803
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium berghei 160255 5821 382 Plasmodium berghei merozoite surface protein gene sequence.
Plasmodium berghei 1762643 5821 234 Plasmodium berghei merozoite surface protein 1 gene, partial cds.
Plasmodium chabaudi adami 3063670 5826 288 Plasmodium chabaudi adami merozoite surface protein-1 (MSP-1) gene, partial cds.
Plasmodium chabaudi adami 9408375 5826 393 Plasmodium chabaudi adami merozoite surface protein-119 (MSP-119) gene, partial cds.
Plasmodium chabaudi 388058 5825 369 Plasmodium chabaudi chabaudi merozoite surface protein-1 gene, 3' end.
Plasmodium chabaudi 388060 5825 369 Plasmodium chabaudi chabaudi merozoite surface protein-1 gene, 3' end.
Plasmodium chabaudi 388062 5825 369 Plasmodium chabaudi chabaudi merozoite surface protein-1 gene, 3'end.
Plasmodium chabaudi 388054 5825 369 Plasmodium chabaudi chabaudi merozoite surface protein-1 gene, 3'end.
Plasmodium vinckei 5733679 5860 291 Plasmodium vinckei strain 2CR merozoite surface protein-1 gene, partial cds.
Plasmodium vinckei 5733681 5860 291 Plasmodium vinckei strain V-52 merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 10504977 5861 410 Plasmodium yoelii merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 160253 5861 382 Plasmodium yoelii merozoite surface protein gene sequence.
Plasmodium yoelii 5733661 5861 285 Plasmodium yoelii strain 1AR merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 5733663 5861 285 Plasmodium yoelii strain 265BY merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 5733665 5861 285 Plasmodium yoelii strain 2BR merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 5733667 5861 282 Plasmodium yoelii strain 2CL merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 5733669 5861 282 Plasmodium yoelii strain 33X merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 5733673 5861 282 Plasmodium yoelii strain 193L merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 5733675 5861 282 Plasmodium yoelii strain 194ZZ merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 5733671 5861 285 Plasmodium yoelii strain 3AE merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 160254 5861 382 Plasmodium yoelii merozoite surface protein gene sequence.
Plasmodium yoelii 5733677 5861 285 Plasmodium yoelii strain N67 merozoite surface protein-1 gene, partial cds.
Plasmodium yoelii 160250 5861 382 Plasmodium yoelii merozoite surface protein gene sequence.
Plasmodium yoelii 160251 5861 382 Plasmodium yoelii merozoite surface protein gene sequence.
Plasmodium yoelii 160252 5861 382 Plasmodium yoelii merozoite surface protein gene sequence.


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