Plasmodium (Vinckeia): Cluster 38 (up to parent cluster)

Number of sequences (GIs)5
Number of distinct taxon IDs (TIs)5
Shortest sequence888 nt -- Plasmodium yoelii nigeriensis aldolase mRNA, partial cds.
Longest sequence1054 nt -- Plasmodium berghei QIMR fructose 1,6-bisphosphate aldolase gene, partial cds.
Maximum alignment density1 0.969
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium berghei 13877312 5821 1054 Plasmodium berghei QIMR fructose 1,6-bisphosphate aldolase gene, partial cds.
Plasmodium chabaudi 13877308 5825 1054 Plasmodium chabaudi AS fructose 1,6-bisphosphate aldolase gene, partial cds.
Plasmodium vinckei 13877310 5860 1054 Plasmodium vinckei fructose 1,6-bisphosphate aldolase gene, partial cds.
Plasmodium yoelii nigeriensis 46403128 31274 888 Plasmodium yoelii nigeriensis aldolase mRNA, partial cds.
Plasmodium yoelii 13877306 5861 1054 Plasmodium yoelii YM fructose 1,6-bisphosphate aldolase gene, partial cds.


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