Plasmodium (Vinckeia): Cluster 44 (up to parent cluster)

Number of sequences (GIs)22
Number of distinct taxon IDs (TIs)14
Shortest sequence996 nt -- Plasmodium vinckei clone VIBA CyO cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.
Longest sequence1655 nt -- Plasmodium berghei cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product.
Maximum alignment density1 0.639
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium atheruri 22651645 160486 1035 Plasmodium atheruri from Atheruri africanus cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.
Plasmodium berghei 90186543 5821 1035 Plasmodium berghei strain ANKA cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium berghei 5020011 5821 1655 Plasmodium berghei cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product.
Plasmodium berghei 22651635 5821 1035 Plasmodium berghei clone NK65 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.
Plasmodium berghei 90186545 5821 1035 Plasmodium berghei strain NK65 cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium chabaudi adami 90186549 5826 1035 Plasmodium chabaudi adami strain 556KA cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium chabaudi adami 90186547 5826 1035 Plasmodium chabaudi adami strain 408XZ cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium chabaudi chabaudi 90186551 31271 1035 Plasmodium chabaudi chabaudi strain AS cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium chabaudi 22651637 5825 1035 Plasmodium chabaudi clone CB cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.
Plasmodium vinckei brucechwatti 90186557 119398 1009 Plasmodium vinckei brucechwatti cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium vinckei lentum 90186561 138297 1020 Plasmodium vinckei lentum strain 408XZ cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium vinckei lentum 90186559 138297 1035 Plasmodium vinckei lentum strain 194ZZ cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium vinckei petteri 90186565 138298 1035 Plasmodium vinckei petteri strain CR cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium vinckei petteri 90186563 138298 1035 Plasmodium vinckei petteri strain BS cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium vinckei vinckei 90186555 54757 1035 Plasmodium vinckei vinckei strain VIBA Cy Pl cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium vinckei 22651641 5860 996 Plasmodium vinckei clone VIBA CyO cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.
Plasmodium vinckei 90186553 5860 1035 Plasmodium vinckei strain EL cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium yoelii killicki 90186569 283801 1033 Plasmodium yoelii killicki strain 193L cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium yoelii nigeriensis 90186571 31274 1010 Plasmodium yoelii nigeriensis strain N67 cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium yoelii yoelii 90186573 73239 1035 Plasmodium yoelii yoelii strain 33X cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium yoelii 90186567 5861 1035 Plasmodium yoelii strain EL cytochrome b (cytb) gene, partial cds; mitochondrial.
Plasmodium yoelii 22651639 5861 1035 Plasmodium yoelii clone 17X cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.


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