Plasmodium (Vinckeia): Cluster 58 (up to parent cluster)

Number of sequences (GIs)19
Number of distinct taxon IDs (TIs)13
Shortest sequence518 nt -- Plasmodium atheruri dihydrofolate reductase gene, partial cds.
Longest sequence518 nt -- Plasmodium atheruri dihydrofolate reductase gene, partial cds.
Maximum alignment density1 1.000
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium atheruri 89512122 160486 518 Plasmodium atheruri dihydrofolate reductase gene, partial cds.
Plasmodium berghei 89512126 5821 518 Plasmodium berghei strain NK65 dihydrofolate reductase gene, partial cds.
Plasmodium berghei 89512124 5821 518 Plasmodium berghei strain ANKA dihydrofolate reductase gene, partial cds.
Plasmodium chabaudi adami 89512130 5826 518 Plasmodium chabaudi adami strain 556KA dihydrofolate reductase gene, partial cds.
Plasmodium chabaudi adami 89512128 5826 518 Plasmodium chabaudi adami strain 408XZ dihydrofolate reductase gene, partial cds.
Plasmodium chabaudi chabaudi 89512132 31271 518 Plasmodium chabaudi chabaudi strain AS dihydrofolate reductase gene, partial cds.
Plasmodium chabaudi chabaudi 89512134 31271 518 Plasmodium chabaudi chabaudi strain CB dihydrofolate reductase gene, partial cds.
Plasmodium vinckei brucechwatti 89512140 119398 518 Plasmodium vinckei brucechwatti dihydrofolate reductase gene, partial cds.
Plasmodium vinckei lentum 89512144 138297 518 Plasmodium vinckei lentum strain 408XZ dihydrofolate reductase gene, partial cds.
Plasmodium vinckei lentum 89512142 138297 518 Plasmodium vinckei lentum strain 194ZZ dihydrofolate reductase gene, partial cds.
Plasmodium vinckei petteri 89512146 138298 518 Plasmodium vinckei petteri strain BS dihydrofolate reductase gene, partial cds.
Plasmodium vinckei petteri 89512148 138298 518 Plasmodium vinckei petteri strain CR dihydrofolate reductase gene, partial cds.
Plasmodium vinckei vinckei 89512138 54757 518 Plasmodium vinckei vinckei strain VIBA Cy Pl dihydrofolate reductase gene, partial cds.
Plasmodium vinckei 89512136 5860 518 Plasmodium vinckei strain EL dihydrofolate reductase gene, partial cds.
Plasmodium yoelii killicki 89512152 283801 518 Plasmodium yoelii killicki strain 193L dihydrofolate reductase gene, partial cds.
Plasmodium yoelii nigeriensis 89512154 31274 518 Plasmodium yoelii nigeriensis strain N67 dihydrofolate reductase gene, partial cds.
Plasmodium yoelii yoelii 89512158 73239 518 Plasmodium yoelii yoelii strain 33X dihydrofolate reductase gene, partial cds.
Plasmodium yoelii yoelii 89512156 73239 518 Plasmodium yoelii yoelii strain 17X dihydrofolate reductase gene, partial cds.
Plasmodium yoelii 89512150 5861 518 Plasmodium yoelii strain EL dihydrofolate reductase gene, partial cds.


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