Plasmodium (Vinckeia): Cluster 59 (up to parent cluster)

Number of sequences (GIs)18
Number of distinct taxon IDs (TIs)12
Shortest sequence650 nt -- Plasmodium vinckei petteri strain CR TufA gene, partial cds; apicoplast.
Longest sequence674 nt -- Plasmodium berghei strain ANKA TufA gene, partial cds; apicoplast.
Maximum alignment density1 0.992
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium atheruri 89512160 160486 669 Plasmodium atheruri TufA gene, partial cds; apicoplast.
Plasmodium berghei 89512164 5821 672 Plasmodium berghei strain NK65 TufA gene, partial cds; apicoplast.
Plasmodium berghei 89512162 5821 674 Plasmodium berghei strain ANKA TufA gene, partial cds; apicoplast.
Plasmodium chabaudi adami 89512168 5826 674 Plasmodium chabaudi adami strain 556KA TufA gene, partial cds; apicoplast.
Plasmodium chabaudi adami 89512166 5826 673 Plasmodium chabaudi adami strain 408XZ TufA gene, partial cds; apicoplast.
Plasmodium chabaudi chabaudi 89512170 31271 674 Plasmodium chabaudi chabaudi strain AS TufA gene, partial cds; apicoplast.
Plasmodium chabaudi chabaudi 89512172 31271 674 Plasmodium chabaudi chabaudi strain CB TufA gene, partial cds; apicoplast.
Plasmodium vinckei lentum 89512180 138297 667 Plasmodium vinckei lentum strain 408XZ TufA gene, partial cds; apicoplast.
Plasmodium vinckei lentum 89512178 138297 673 Plasmodium vinckei lentum strain 194ZZ TufA gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89512184 138298 650 Plasmodium vinckei petteri strain CR TufA gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89512182 138298 667 Plasmodium vinckei petteri strain BS TufA gene, partial cds; apicoplast.
Plasmodium vinckei vinckei 89512176 54757 668 Plasmodium vinckei vinckei strain VIBA Cy Pl TufA gene, partial cds; apicoplast.
Plasmodium vinckei 89512174 5860 667 Plasmodium vinckei strain EL TufA gene, partial cds; apicoplast.
Plasmodium yoelii killicki 89512188 283801 674 Plasmodium yoelii killicki strain 193L TufA gene, partial cds; apicoplast.
Plasmodium yoelii nigeriensis 89512190 31274 661 Plasmodium yoelii nigeriensis strain N67 TufA gene, partial cds; apicoplast.
Plasmodium yoelii yoelii 89512194 73239 660 Plasmodium yoelii yoelii strain 33X TufA gene, partial cds; apicoplast.
Plasmodium yoelii yoelii 89512192 73239 669 Plasmodium yoelii yoelii strain 17X TufA gene, partial cds; apicoplast.
Plasmodium yoelii 89512186 5861 674 Plasmodium yoelii strain EL TufA gene, partial cds; apicoplast.


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