Plasmodium (Vinckeia): Cluster 60 (up to parent cluster)

Number of sequences (GIs)19
Number of distinct taxon IDs (TIs)13
Shortest sequence549 nt -- Plasmodium vinckei petteri isolate CR ORF470 gene, partial cds; apicoplast.
Longest sequence649 nt -- Plasmodium atheruri ORF470 gene, partial cds; apicoplast.
Maximum alignment density1 0.978
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium atheruri 89574315 160486 649 Plasmodium atheruri ORF470 gene, partial cds; apicoplast.
Plasmodium berghei 89574319 5821 633 Plasmodium berghei isolate NK65 ORF470 gene, partial cds; apicoplast.
Plasmodium berghei 89574317 5821 631 Plasmodium berghei isolate ANKA ORF470 gene, partial cds; apicoplast.
Plasmodium chabaudi adami 89574321 5826 629 Plasmodium chabaudi adami isolate 408XZ ORF470 gene, partial cds; apicoplast.
Plasmodium chabaudi adami 89574323 5826 639 Plasmodium chabaudi adami isolate 556KA ORF470 gene, partial cds; apicoplast.
Plasmodium chabaudi chabaudi 89574325 31271 641 Plasmodium chabaudi chabaudi isolate AS ORF470 gene, partial cds; apicoplast.
Plasmodium chabaudi chabaudi 89574327 31271 637 Plasmodium chabaudi chabaudi isolate CB ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei brucechwatti 89574333 119398 622 Plasmodium vinckei brucechwatti ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei lentum 89574335 138297 611 Plasmodium vinckei lentum isolate 194ZZ ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei lentum 89574337 138297 641 Plasmodium vinckei lentum isolate 408XZ ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89574341 138298 549 Plasmodium vinckei petteri isolate CR ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89574339 138298 641 Plasmodium vinckei petteri isolate BS ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei vinckei 89574331 54757 642 Plasmodium vinckei vinckei isolate VIBA Cy Pl ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei 89574329 5860 647 Plasmodium vinckei isolate EL ORF470 gene, partial cds; apicoplast.
Plasmodium yoelii killicki 89574345 283801 649 Plasmodium yoelii killicki isolate 193L ORF470 gene, partial cds; apicoplast.
Plasmodium yoelii nigeriensis 89574347 31274 649 Plasmodium yoelii nigeriensis isolate N67 ORF470 gene, partial cds; apicoplast.
Plasmodium yoelii yoelii 89574349 73239 649 Plasmodium yoelii yoelii isolate 17X ORF470 gene, partial cds; apicoplast.
Plasmodium yoelii yoelii 89574351 73239 649 Plasmodium yoelii yoelii isolate 33X ORF470 gene, partial cds; apicoplast.
Plasmodium yoelii 89574343 5861 649 Plasmodium yoelii isolate EL ORF470 gene, partial cds; apicoplast.


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