Lasiosphaeriaceae: Cluster 16 (up to parent cluster)

Number of sequences (GIs) 21 Number of distinct taxon IDs (TIs) 21 Shortest sequence 460 nt -- Arnium macrotheca glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Longest sequence 488 nt -- Podospora communis glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Maximum alignment density1 0.974 Paralogous sequences present?2 -

1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).   2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

Download sequences as... Unaligned cluster (Fasta format) Clustal W alignment (Fasta format)

Download tree ... Clustal alignment tree (gi#) (ti#) (gi#_ti#) ('name') ('name_gi#_ti#')

NCBI taxon name GI TI Length Defline Arnium macrotheca 145968412 438768 460 Arnium macrotheca glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Cercophora acanthigera 145968414 438769 477 Cercophora acanthigera glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Cercophora coprophila 145968416 314027 477 Cercophora coprophila glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Cercophora coronata 145968418 438770 460 Cercophora coronata glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Cercophora mirabilis 145968420 252187 473 Cercophora mirabilis glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Cercophora tuberculata 145968422 438771 475 Cercophora tuberculata glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora anserina 145968426 5145 482 Podospora anserina glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora communis 145968430 438773 488 Podospora communis glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora curvuloides 145968432 261695 463 Podospora curvuloides glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora decipiens 145968434 261697 484 Podospora decipiens glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora fimiseda 145968436 252190 471 Podospora fimiseda glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora formosana 145968438 438774 467 Podospora formosana glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora immersa 145968440 438775 474 Podospora immersa glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora inflatula 145968442 438776 473 Podospora inflatula glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora longicaudata 145968444 438777 483 Podospora longicaudata glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora multipilosa 145968446 438778 482 Podospora multipilosa glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora myriaspora 145968448 343504 483 Podospora myriaspora glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora pleiospora 145968450 261701 464 Podospora pleiospora glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora prethopodalis 145968452 438779 488 Podospora prethopodalis glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Podospora setosa 145968454 179329 475 Podospora setosa glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds. Zygopleurage zygospora 145968458 252195 482 Zygopleurage zygospora glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.

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