Podospora: Cluster 16 (up to parent cluster)

Number of sequences (GIs)14
Number of distinct taxon IDs (TIs)14
Shortest sequence463 nt -- Podospora curvuloides glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Longest sequence488 nt -- Podospora communis glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Maximum alignment density1 0.977
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Podospora anserina 145968426 5145 482 Podospora anserina glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora communis 145968430 438773 488 Podospora communis glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora curvuloides 145968432 261695 463 Podospora curvuloides glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora decipiens 145968434 261697 484 Podospora decipiens glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora fimiseda 145968436 252190 471 Podospora fimiseda glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora formosana 145968438 438774 467 Podospora formosana glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora immersa 145968440 438775 474 Podospora immersa glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora inflatula 145968442 438776 473 Podospora inflatula glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora longicaudata 145968444 438777 483 Podospora longicaudata glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora multipilosa 145968446 438778 482 Podospora multipilosa glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora myriaspora 145968448 343504 483 Podospora myriaspora glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora pleiospora 145968450 261701 464 Podospora pleiospora glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora prethopodalis 145968452 438779 488 Podospora prethopodalis glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.
Podospora setosa 145968454 179329 475 Podospora setosa glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, partial cds.


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