Rhizaria: Cluster 335

Number of sequences (GIs)37
Number of distinct taxon IDs (TIs)1
Shortest sequence352 nt -- Marteilia refringens clone Mxenost-15 28S-18S ribosomal RNA intergenic spacer, partial sequence.
Longest sequence525 nt -- Marteilia refringens partial intergenic spacer (IGS), clone MgaVen-3.
Maximum alignment density1 0.973
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Marteilia refringens 194136543 107386 352 Marteilia refringens clone Mxenost-15 28S-18S ribosomal RNA intergenic spacer, partial sequence.
Marteilia refringens 194136540 107386 356 Marteilia refringens clone Mxenost-01 28S-18S ribosomal RNA intergenic spacer, partial sequence.
Marteilia refringens 194136545 107386 387 Marteilia refringens clone Mxenost-18 28S-18S ribosomal RNA intergenic spacer, partial sequence.
Marteilia refringens 54311589 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaVen-3.
Marteilia refringens 54311590 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaVen-41.
Marteilia refringens 54311568 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone OedHue-28.
Marteilia refringens 54311569 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone OedHue-30.
Marteilia refringens 54311570 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone OedHue-31.
Marteilia refringens 54311585 107386 524 Marteilia refringens partial intergenic spacer (IGS), clone MgaTri-1.
Marteilia refringens 54311571 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone OedHue-37.
Marteilia refringens 54311591 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaVen-49.
Marteilia refringens 54311580 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaVigo-86.
Marteilia refringens 54311583 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaVigo-33.
Marteilia refringens 54311584 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaVigo-48.
Marteilia refringens 54311587 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaTri-10.
Marteilia refringens 54311572 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaHue-17.
Marteilia refringens 54311582 107386 525 Marteilia refringens partial intergenic spacer (IGS), clone MgaVigo-1.
Marteilia refringens 54311573 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaHue-18.
Marteilia refringens 54311588 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaTri-24.
Marteilia refringens 194136542 107386 523 Marteilia refringens clone Mxenost-03 28S-18S ribosomal RNA intergenic spacer, partial sequence.
Marteilia refringens 190014401 107386 523 Marteilia refringens partial IGS, isolated from Solen marginatus, isolate 7.
Marteilia refringens 190014402 107386 523 Marteilia refringens partial IGS, isolated from Solen marginatus, isolate 12.
Marteilia refringens 192281976 107386 523 Marteilia refringens partial IGS, isolated from Mytilus galloprovinci, isolate 21.
Marteilia refringens 192281977 107386 525 Marteilia refringens partial IGS, isolated from Mytilus galloprovinci, isolate 27.
Marteilia refringens 54311575 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaHue-22.
Marteilia refringens 54311577 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaHue-33.
Marteilia refringens 54311578 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaVigo-60.
Marteilia refringens 54311579 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaVigo-80.
Marteilia refringens 54311586 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaTri-9.
Marteilia refringens 190014404 107386 523 Marteilia refringens partial IGS, isolated from Solen marginatus, isolate 35.
Marteilia refringens 194136541 107386 522 Marteilia refringens clone Mxenost-02 28S-18S ribosomal RNA intergenic spacer, partial sequence.
Marteilia refringens 54311576 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaHue-26.
Marteilia refringens 54311581 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaVigo-91.
Marteilia refringens 190014403 107386 523 Marteilia refringens partial IGS, isolated from Solen marginatus, isolate 28.
Marteilia refringens 54311574 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone MgaHue-19.
Marteilia refringens 54311567 107386 523 Marteilia refringens partial intergenic spacer (IGS), clone OedHue-19.
Marteilia refringens 190014400 107386 523 Marteilia refringens partial IGS, isolated from Solen marginatus, isolate 3.


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