Rhizaria: Cluster 5

Number of sequences (GIs)15
Number of distinct taxon IDs (TIs)1
Shortest sequence1016 nt -- Globigerinoides sacculifer small subunit ribosomal RNA gene, partial sequence.
Longest sequence1048 nt -- Globigerinoides sacculifer gene for 18S rRNA, partial sequence, isolate: OKI_4_1.
Maximum alignment density1 0.988
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

Download sequences as...
Download tree ...


NCBI taxon name GI TI Length Defline
Globigerinoides sacculifer 2582710 45991 1033 G.sacculifer DNA for 18S ribosomal RNA.
Globigerinoides sacculifer 134026454 45991 1048 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, isolate: OKI_4_1.
Globigerinoides sacculifer 261823904 45991 1035 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, clone: OKI_1_3.
Globigerinoides sacculifer 134026452 45991 1046 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, isolate: OKI_2_1.
Globigerinoides sacculifer 261823905 45991 1035 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, clone: OKI_1_4.
Globigerinoides sacculifer 2582709 45991 1035 G.sacculifer DNA for 18S ribosomal RNA.
Globigerinoides sacculifer 134026451 45991 1046 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, isolate: OKI_1_1.
Globigerinoides sacculifer 134026453 45991 1047 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, isolate: OKI_3_1.
Globigerinoides sacculifer 261823903 45991 1035 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, clone: OKI_1_2.
Globigerinoides sacculifer 261823907 45991 1035 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, clone: OKI_2_3.
Globigerinoides sacculifer 261823909 45991 1035 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, clone: OKI_4_2.
Globigerinoides sacculifer 2565097 45991 1016 Globigerinoides sacculifer small subunit ribosomal RNA gene, partial sequence.
Globigerinoides sacculifer 261823908 45991 1035 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, clone: OKI_3_2.
Globigerinoides sacculifer 1666809 45991 1016 Globigerinoides sacculifer small subunit ribosomal RNA gene, partial sequence.
Globigerinoides sacculifer 261823906 45991 1035 Globigerinoides sacculifer gene for 18S rRNA, partial sequence, clone: OKI_2_2.


Back to taxonomic hierarchy view
Back to Phylota Browser home