Parabasalidea: Cluster 161

Number of sequences (GIs)4
Number of distinct taxon IDs (TIs)4
Shortest sequence1056 nt -- Teranympha mirabilis gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Longest sequence1095 nt -- Eucomonympha sp. HsE15 gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Maximum alignment density1 0.989
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Eucomonympha sp. HsE15 218117502 544391 1095 Eucomonympha sp. HsE15 gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Eucomonympha sp. HsE38 218117500 544392 1088 Eucomonympha sp. HsE38 gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Pseudotrichonympha grassii 128168578 104083 1091 Pseudotrichonympha grassii gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Teranympha mirabilis 218117498 285686 1056 Teranympha mirabilis gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.


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