Parabasalidea: Cluster 73

Number of sequences (GIs)27
Number of distinct taxon IDs (TIs)16
Shortest sequence942 nt -- Foaina nana gapdh mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds, clone: CdFG14.
Longest sequence1079 nt -- Stephanonympha sp. Nk3 gap3 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Maximum alignment density1 0.934
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Caduceia versatilis 237858258 402894 967 Caduceia versatilis gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds, clone: CcCG12.
Devescovina sp. Nk9 128168597 336692 1072 Devescovina sp. Nk9 gap2 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Devescovina sp. Nk9 128168592 336692 1072 Devescovina sp. Nk9 gap1 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Foaina nana 237858256 561876 942 Foaina nana gapdh mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds, clone: CdFG14.
Gigantomonas herculea 237858250 561874 994 Gigantomonas herculea gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds, clone: HmGG1.
Gigantomonas herculea 237858248 561874 987 Gigantomonas herculea gapdh 2 mRNA for glyceraldehyde-3-phosphate dehydrogenase 2, partial cds, clone: HmGG5.
Joenia annectens 237858238 450820 967 Joenia annectens gapdh mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds, clone: KfJG21.
Joenia annectens 237858236 450820 967 Joenia annectens gapdh mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds, clone: KfJG23.
Joenina pulchella 237858234 561866 998 Joenina pulchella gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds, clone: PaJG3.
Joenina pulchella 237858232 561866 997 Joenina pulchella gapdh 2 mRNA for glyceraldehyde-3-phosphate dehydrogenase 2, partial cds, clone: PaJG8.
Joenoides intermedia 237858224 561868 990 Joenoides intermedia gapdh 3 mRNA for glyceraldehyde-3-phosphate dehydrogenase 3, partial cds, clone: HmJG7.
Joenoides intermedia 237858230 561868 993 Joenoides intermedia gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds, clone: HmJG2.
Joenoides intermedia 237858222 561868 993 Joenoides intermedia gapdh 2 mRNA for glyceraldehyde-3-phosphate dehydrogenase 2, partial cds, clone: HmJG3.
Joenoides intermedia 237858226 561868 994 Joenoides intermedia gapdh 4 mRNA for glyceraldehyde-3-phosphate dehydrogenase 4, partial cds, clone: HmJG8.
Macrotrichomonas sp. GfMG19 237858228 561885 1056 Macrotrichomonas sp. GfMG19 gapdh 2 mRNA for glyceraldehyde-3-phosphate dehydrogenase 2, partial cds.
Macrotrichomonas sp. GfMG7 237858242 561884 1058 Macrotrichomonas sp. GfMG7 gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds.
Macrotrichomonas sp. GsMG10 237858244 561883 991 Macrotrichomonas sp. GsMG10 gapdh 2 mRNA for glyceraldehyde-3-phosphate dehydrogenase 2, partial cds.
Macrotrichomonas sp. GsMG9 237858246 561882 990 Macrotrichomonas sp. GsMG9 gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds.
Metacoronympha senta 237858266 181552 967 Metacoronympha senta gapdh gene for glyceraldehyde-3-phosphate dehydrogenase, partial cds, clone: IsMG1.
Metadevescovina cuspidata 237858252 561881 987 Metadevescovina cuspidata gapdh 2 mRNA for glyceraldehyde-3-phosphate dehydrogenase 2, partial cds, clone: ImMG8.
Metadevescovina cuspidata 237858254 561881 991 Metadevescovina cuspidata gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds, clone: ImMG5.
Snyderella tabogae 237858262 181547 996 Snyderella tabogae gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds, clone: CcSnG3.
Snyderella tabogae 237858260 181547 998 Snyderella tabogae gapdh 2 mRNA for glyceraldehyde-3-phosphate dehydrogenase 2, partial cds, clone: CcSnG14.
Stephanonympha sp. CcStG14 237858264 561880 1001 Stephanonympha sp. CcStG14 gapdh mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Stephanonympha sp. Nk3 128168601 336694 1078 Stephanonympha sp. Nk3 gap1 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Stephanonympha sp. Nk3 128168606 336694 1078 Stephanonympha sp. Nk3 gap2 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
Stephanonympha sp. Nk3 128168611 336694 1079 Stephanonympha sp. Nk3 gap3 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.


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