Parabasalidea: Cluster 81

Number of sequences (GIs)4
Number of distinct taxon IDs (TIs)4
Shortest sequence970 nt -- Pentatrichomonas hominis putative cytosolic malate dehydrogenase (MDH) mRNA, partial cds.
Longest sequence1246 nt -- Trichomonas vaginalis cytosolic malate dehydrogenase gene, complete cds.
Maximum alignment density1 0.844
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Pentatrichomonas hominis 9965341 5728 970 Pentatrichomonas hominis putative cytosolic malate dehydrogenase (MDH) mRNA, partial cds.
Tetratrichomonas gallinarum 12044148 5730 993 Tetratrichomonas gallinarum cytosolic malate dehydrogenase (MDH) mRNA, partial cds.
Trichomonas tenax 9965339 43075 997 Trichomonas tenax putative cytosolic malate dehydrogenase (MDH) mRNA, partial cds.
Trichomonas vaginalis 1054960 5722 1246 Trichomonas vaginalis cytosolic malate dehydrogenase gene, complete cds.


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