Parabasalidea: Cluster 96

Number of sequences (GIs)3
Number of distinct taxon IDs (TIs)2
Shortest sequence973 nt -- Tetratrichomonas gallinarum glyceraldehyde-3-phosphate dehydrogenase (gap) gene, partial cds.
Longest sequence1053 nt -- Trichomonas vaginalis glyceraldehyde 3-phosphate dehydrogenase mRNA, 3' end.
Maximum alignment density1 0.949
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

Download sequences as...
Download tree ...


NCBI taxon name GI TI Length Defline
Tetratrichomonas gallinarum 2511559 5730 973 Tetratrichomonas gallinarum glyceraldehyde-3-phosphate dehydrogenase (gap) gene, partial cds.
Trichomonas vaginalis 2511549 5722 973 Trichomonas vaginalis glyceraldehyde-3-phosphate dehydrogenase (gap2) gene, partial cds.
Trichomonas vaginalis 432486 5722 1053 Trichomonas vaginalis glyceraldehyde 3-phosphate dehydrogenase mRNA, 3' end.


Back to taxonomic hierarchy view
Back to Phylota Browser home