Heterolobosea: Cluster 113

Number of sequences (GIs)1
Number of distinct taxon IDs (TIs)1
Shortest sequence414 nt -- Neovahlkampfia damariscottae ITS1, 5.8S rRNA gene and ITS2, type strain CCAP1588/7T.
Longest sequence414 nt -- Neovahlkampfia damariscottae ITS1, 5.8S rRNA gene and ITS2, type strain CCAP1588/7T.
Maximum alignment density1 1.000
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Neovahlkampfia damariscottae 54792387 166956 414 Neovahlkampfia damariscottae ITS1, 5.8S rRNA gene and ITS2, type strain CCAP1588/7T.


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