Plasmodium vinckei: Cluster 15 (up to parent cluster)

Number of sequences (GIs)7
Number of distinct taxon IDs (TIs)5
Shortest sequence628 nt -- Plasmodium vinckei brucechwatti cysteine protease gene, partial cds.
Longest sequence631 nt -- Plasmodium vinckei lentum strain 194ZZ cysteine protease gene, partial cds.
Maximum alignment density1 0.997
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium vinckei brucechwatti 89511897 119398 628 Plasmodium vinckei brucechwatti cysteine protease gene, partial cds.
Plasmodium vinckei lentum 89511899 138297 631 Plasmodium vinckei lentum strain 194ZZ cysteine protease gene, partial cds.
Plasmodium vinckei lentum 89511901 138297 631 Plasmodium vinckei lentum strain 408XZ cysteine protease gene, partial cds.
Plasmodium vinckei petteri 89511903 138298 628 Plasmodium vinckei petteri strain BS cysteine protease gene, partial cds.
Plasmodium vinckei petteri 89511905 138298 628 Plasmodium vinckei petteri strain CR cysteine protease gene, partial cds.
Plasmodium vinckei vinckei 89511895 54757 628 Plasmodium vinckei vinckei strain VIBA Cy Pl cysteine protease gene, partial cds.
Plasmodium vinckei 89511893 5860 631 Plasmodium vinckei strain EL cysteine protease gene, partial cds.


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