Plasmodium vinckei: Cluster 16 (up to parent cluster)

Number of sequences (GIs)7
Number of distinct taxon IDs (TIs)5
Shortest sequence518 nt -- Plasmodium vinckei brucechwatti dihydrofolate reductase gene, partial cds.
Longest sequence518 nt -- Plasmodium vinckei brucechwatti dihydrofolate reductase gene, partial cds.
Maximum alignment density1 1.000
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium vinckei brucechwatti 89512140 119398 518 Plasmodium vinckei brucechwatti dihydrofolate reductase gene, partial cds.
Plasmodium vinckei lentum 89512142 138297 518 Plasmodium vinckei lentum strain 194ZZ dihydrofolate reductase gene, partial cds.
Plasmodium vinckei lentum 89512144 138297 518 Plasmodium vinckei lentum strain 408XZ dihydrofolate reductase gene, partial cds.
Plasmodium vinckei petteri 89512146 138298 518 Plasmodium vinckei petteri strain BS dihydrofolate reductase gene, partial cds.
Plasmodium vinckei petteri 89512148 138298 518 Plasmodium vinckei petteri strain CR dihydrofolate reductase gene, partial cds.
Plasmodium vinckei vinckei 89512138 54757 518 Plasmodium vinckei vinckei strain VIBA Cy Pl dihydrofolate reductase gene, partial cds.
Plasmodium vinckei 89512136 5860 518 Plasmodium vinckei strain EL dihydrofolate reductase gene, partial cds.


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