Plasmodium vinckei: Cluster 17 (up to parent cluster)

Number of sequences (GIs)6
Number of distinct taxon IDs (TIs)4
Shortest sequence650 nt -- Plasmodium vinckei petteri strain CR TufA gene, partial cds; apicoplast.
Longest sequence673 nt -- Plasmodium vinckei lentum strain 194ZZ TufA gene, partial cds; apicoplast.
Maximum alignment density1 0.989
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

Download sequences as...
Download tree ...


NCBI taxon name GI TI Length Defline
Plasmodium vinckei lentum 89512178 138297 673 Plasmodium vinckei lentum strain 194ZZ TufA gene, partial cds; apicoplast.
Plasmodium vinckei lentum 89512180 138297 667 Plasmodium vinckei lentum strain 408XZ TufA gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89512184 138298 650 Plasmodium vinckei petteri strain CR TufA gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89512182 138298 667 Plasmodium vinckei petteri strain BS TufA gene, partial cds; apicoplast.
Plasmodium vinckei vinckei 89512176 54757 668 Plasmodium vinckei vinckei strain VIBA Cy Pl TufA gene, partial cds; apicoplast.
Plasmodium vinckei 89512174 5860 667 Plasmodium vinckei strain EL TufA gene, partial cds; apicoplast.


Back to taxonomic hierarchy view
Back to Phylota Browser home