Plasmodium vinckei: Cluster 18 (up to parent cluster)

Number of sequences (GIs)7
Number of distinct taxon IDs (TIs)5
Shortest sequence549 nt -- Plasmodium vinckei petteri isolate CR ORF470 gene, partial cds; apicoplast.
Longest sequence647 nt -- Plasmodium vinckei isolate EL ORF470 gene, partial cds; apicoplast.
Maximum alignment density1 0.961
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

Download sequences as...
Download tree ...


NCBI taxon name GI TI Length Defline
Plasmodium vinckei brucechwatti 89574333 119398 622 Plasmodium vinckei brucechwatti ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei lentum 89574335 138297 611 Plasmodium vinckei lentum isolate 194ZZ ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei lentum 89574337 138297 641 Plasmodium vinckei lentum isolate 408XZ ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89574341 138298 549 Plasmodium vinckei petteri isolate CR ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei petteri 89574339 138298 641 Plasmodium vinckei petteri isolate BS ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei vinckei 89574331 54757 642 Plasmodium vinckei vinckei isolate VIBA Cy Pl ORF470 gene, partial cds; apicoplast.
Plasmodium vinckei 89574329 5860 647 Plasmodium vinckei isolate EL ORF470 gene, partial cds; apicoplast.


Back to taxonomic hierarchy view
Back to Phylota Browser home