Plasmodium vinckei: Cluster 19 (up to parent cluster)

Number of sequences (GIs)4
Number of distinct taxon IDs (TIs)2
Shortest sequence489 nt -- Plasmodium vinckei lentum isolate 194ZZ RNA polymerase II (Rbp1) gene, partial cds.
Longest sequence489 nt -- Plasmodium vinckei lentum isolate 194ZZ RNA polymerase II (Rbp1) gene, partial cds.
Maximum alignment density1 1.000
Paralogous sequences present?2-
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  2Assayed via a phylogenetic test of orthology (Sanderson et al., 2003), which checks whether a tree forcing all sequences from the same species to be a clade is significantly worse than one allowing them to be phylogenetically dispersed. If so, this is presumptive evidence of paralogy, lineage sorting, mistaken identification, or other causes of such incongruence.

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NCBI taxon name GI TI Length Defline
Plasmodium vinckei lentum 213867915 138297 489 Plasmodium vinckei lentum isolate 194ZZ RNA polymerase II (Rbp1) gene, partial cds.
Plasmodium vinckei 213867917 5860 489 Plasmodium vinckei strain EL RNA polymerase II (Rbp1) gene, partial cds.
Plasmodium vinckei 213867911 5860 489 Plasmodium vinckei isolate VIBA CyO RNA polymerase II (Rbp1) gene, partial cds.
Plasmodium vinckei 213867913 5860 489 Plasmodium vinckei isolate VIBA CyP1 RNA polymerase II (Rbp1) gene, partial cds.


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