Cluster set at subtree whose root is 'Fungi incertae sedis'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
6-54895531942 0.676- 0.000Pilaira anomala strain FSU268 clone 4 beta-tubulin (btub) gene, partial cds.
8-3054983403415 0.471- 0.000Zygomycete sp. AM-2008a isolate AF016 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
9-1744482151054 0.637- 0.000Schizangiella serpentis strain ARSEF 203 28S ribosomal RNA gene, partial sequence.
10-1221879882263 0.546- 0.000Mucor racemosus TEF-2 gene for elongation factor 1-alpha (EF-1-alpha).
12-1253352521309 0.669- 0.000Absidia glauca actin (ACT2) mRNA, complete cds.
20-835932671193 0.512- 0.000Choanephora infundibulifera f. cucurbitarum genes for ITS1, 5.8S rRNA, ITS2, partial and complete sequence.
22-1122491511025 0.586- 0.000Mortierella alpina strain CZ461 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
24-55498576 0.928- 0.000Mortierella alpina isolate 16/1.6.1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
27-2635399711 0.806- 0.000Mortierella sp. TmMRS1 genes for ITS1, 5.8S rRNA, ITS2, partial and complete sequence.
34-1725399399 1.000- 0.000Zygorhynchus exponens mitochondrial cytb gene for cytochrome b, partial cds, strain: IFM 40789.
53-242818736510 0.538- 0.000Mucor racemosus 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain ATCC1216B.
73-819521775 0.888- 0.000Cunninghamella bertholletiae strain NRRL 1380 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
83-1516596958 0.739- 0.000Cunninghamella bertholletiae 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence.
90-728640750 0.942- 0.000Actinomucor sp. JHS0708 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
91-916433548 0.819- 0.000Ambomucor seriatoinflatus translation elongation factor 1 alpha (EF-1alpha) gene, partial cds.
96-4515691572 1.000- 0.000Mucor sp. EIM-10 delta-6 fatty acid desaturase mRNA, complete cds.
102-66546546 1.000- 0.000Mucor racemosus f. racemosus partial high affinity iron permease gene, strain NRRL 3640.
120-9139992160 0.582- 0.000Mucor circinelloides partial tubA gene for alpha-tubulin.
130-68550550 1.000- 0.000Mucor hiemalis isolate 58 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial.
132-66776934 0.947- 0.000Cunninghamella septata strain Cu-230 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.
136-543225477 0.910- 0.000Mycocladus sp. ETKT-2008 strain HKU22 elongation factor 1-alpha gene, partial cds.
150-4723911050 0.763- 0.000Absidia corymbifera genes for 18S rRNA, ITS1, 5.8S rRNA,ITS2, 28S rRNA.
154-454399866 0.835- 0.000Absidia corymbifera clone bandF11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
173-45649793 0.896- 0.000Coemansia aciculifera gene for 28S rRNA, partial sequence, strain: KYK00188.
253-121213481234 0.539- 0.000Rhizopus microsporus culture-collection NRRL:54029 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
254-613318567 0.797- 0.000Rhizopus microsporus var. chinensis strain CBS 631.82 28S-18S ribosomal RNA intergenic spacer and 18S ribosomal RNA gene, partial sequence.
255-4138103174 0.419- 0.000Rhizopus oryzae lipase precursor gene, complete cds.
256-612864875 0.990- 0.000Rhizopus microsporus var. microsporus isolate 39Rmm intergenic spacer and small subunit ribosomal RNA gene, partial sequence.
261-818549698 0.813- 0.000Rhizomucor pusillus partial high affinity iron permease gene, exons 1-3, strain WRLCN(M) 231.
268-1947459531 0.923- 0.000Rhizopus schipperae strain ATCC 96514 orotidine-5'-phosphate decarboxylase (pyrG) gene, partial cds.
279-4813801690 0.911- 0.000Rhizopus stolonifer delta-6-fatty acid desaturase gene, complete cds.
365-55625774 0.866- 0.000Mucoromycotina sp. FF67 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence.
371-57319831 0.664- 0.000Syncephalastrum sp. TF1TZG large subunit ribosomal RNA gene, partial sequence.
400-920370371 0.998- 0.000Pilaira anomala strain ATCC 36774 large subunit ribosomal RNA gene, partial sequence; mitochondrial.
406-623543836 0.731- 0.000Umbelopsis sp. FF19 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
410-911184205 0.924- 0.000Umbelopsis angularis 18S rRNA gene (partial), ITS1 and 5.8S rRNA gene (partial), strain CBS 914.85.
415-518180188 0.977- 0.000Umbelopsis isabellina genes for 18S rRNA, ITS1, 5.8S rRNA, strain: P11087.
421-45498552 0.954- 0.000Mortierella sp. olrim338 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
497-40517311024 0.822- 0.000Basidiobolus haptosporus strain ARSEF 6380 RNA polymerase II second largest subunit-like (RPB2) gene, partial sequence.
498-1120596702 0.936- 0.000Basidiobolus microsporus strain ARSEF 265 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
499-44120122 0.992- 0.000G.hibernus 5S rRNA.
505-44362441 0.950- 0.000Entomophthoraceae sp. ARSEF 7942 small subunit ribosomal RNA gene, partial sequence; mitochondrial.
507-4613811654 0.874- 0.000Entomophthora muscae isolate AFTOL-ID 28 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
511-3355776943 0.925- 0.000Conidiobolus osmodes strain ARSEF 79 28S ribosomal RNA gene, partial sequence.
512-610191235 0.840- 0.000Entomophthora schizophorae glyceraldehyde-3-phosphate dehydrogenase gene, partial cds.
514-610258283 0.984- 0.000Entomophthora muscae strain ARSEF 6132 internal transcribed spacer 1, complete sequence.
526-3641269636 0.571- 0.000Batkoa apiculata strain ARSEF 3130 small subunit ribosomal RNA gene, partial sequence; mitochondrial.
542-411395889 0.818- 0.000Conidiobolus coronatus strain ARSEF 206 28S ribosomal RNA gene, partial sequence.
559-6109721066 0.954- 0.000Batkoa sp. ARSEF 328 28S ribosomal RNA gene, partial sequence.
598-2848633845 0.923- 0.000Harpella melusinae clone 13-1-2 28S ribosomal RNA gene, partial sequence.
602-6711621374 0.908- 0.000Capniomyces stellatus beta-tubulin (btub) gene, partial cds.
622-66583738 0.899- 0.000Ramicandelaber brevisporus gene for 28S rRNA, partial sequence, strain: NBRC100469.
634-56763827 0.936- 0.000Orphella catalaunica 28S ribosomal RNA gene, partial sequence.

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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