Cluster set at subtree whose root is 'Magnaporthe grisea'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0101118481848 1.000- 0.000Magnaporthe grisea 70-15 biotrophy-associated secreted protein 1 gene, complete cds.-
1111118851885 1.000- 0.000Magnaporthe grisea 70-15 biotrophy-associated secreted protein 2 gene, complete cds.-
2-1120262026 1.000- 0.000Magnaporthe grisea gene for Csm1, complete cds.-
3-1118091809 1.000- 0.000Magnaporthe grisea transposon LTR retrotransposon MAGGY gag (gag) gene, partial cds, and reverse transcriptase (pol) gene, complete cds.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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