Cluster set at subtree whose root is 'Nucleariidae'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0-6817313018 0.754- 0.000Nuclearia moebiusi 18S small subunit ribosomal RNA, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA, partial sequence.
1-11705705 1.000- 0.000Nuclearia moebiusi strain CCAP1552/3 beta-tubulin gene, partial cds.-
2-1136913691 1.000- 0.000Nuclearia simplex 28S large subunit ribosomal RNA gene, complete sequence.-
3-237841128 0.832- 0.000Nuclearia simplex actin mRNA, complete cds.-
4-1112831283 1.000- 0.000Nuclearia simplex strain CCAP1552/4 ef1a mRNA, partial cds.-
5-1114161416 1.000- 0.000Nuclearia simplex strain CCAP1552/4 HSP70 mRNA, partial cds.-
6-11993993 1.000- 0.000Nuclearia simplex strain CCAP1552/4 alpha-tubulin mRNA, partial cds.-
7-22937939 0.999- 0.000Nuclearia sp. W3 small subunit ribosomal RNA gene, partial sequence.-
8-11977977 1.000- 0.000Nuclearia sp. 2H small subunit ribosomal RNA gene, partial sequence.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.

Back to taxonomic hierarchy view