Cluster set at node 'Plasmodium atheruri' (and only this node)

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0111607607 1.000- 0.000Plasmodium atheruri strain R20 cytochrome b (cytb) gene, partial cds; mitochondrial.-
12129851005 0.990- 0.000Plasmodium atheruri cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial.-
21012508531 0.978- 0.000Plasmodium atheruri caseinolytic protease C gene, partial cds; apicoplast.-
31111186186 1.000- 0.000Plasmodium atheruri strain R20 adenylosuccinate lyase (asl) gene, partial cds.-
41901112061206 1.000- 0.000Plasmodium atheruri circumsporozoite protein gene, complete cds.-
5441110351035 1.000- 0.000Plasmodium atheruri from Atheruri africanus cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.-
65711602602 1.000- 0.000Plasmodium atheruri cysteine protease gene, partial cds.-
75811518518 1.000- 0.000Plasmodium atheruri dihydrofolate reductase gene, partial cds.-
85911669669 1.000- 0.000Plasmodium atheruri TufA gene, partial cds; apicoplast.-
96011649649 1.000- 0.000Plasmodium atheruri ORF470 gene, partial cds; apicoplast.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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