Cluster set at node 'Plasmodium atheruri' (and only this node)

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0111607607 1.000- 0.000Plasmodium atheruri strain R20 cytochrome b (cytb) gene, partial cds; mitochondrial.-
12129851005 0.990- 0.000Plasmodium atheruri cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial.-
21012508531 0.978- 0.000Plasmodium atheruri caseinolytic protease C gene, partial cds; apicoplast.-
31111186186 1.000- 0.000Plasmodium atheruri strain R20 adenylosuccinate lyase (asl) gene, partial cds.-
41901112061206 1.000- 0.000Plasmodium atheruri circumsporozoite protein gene, complete cds.-
5441110351035 1.000- 0.000Plasmodium atheruri from Atheruri africanus cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product.-
65711602602 1.000- 0.000Plasmodium atheruri cysteine protease gene, partial cds.-
75811518518 1.000- 0.000Plasmodium atheruri dihydrofolate reductase gene, partial cds.-
85911669669 1.000- 0.000Plasmodium atheruri TufA gene, partial cds; apicoplast.-
96011649649 1.000- 0.000Plasmodium atheruri ORF470 gene, partial cds; apicoplast.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.

Back to taxonomic hierarchy view