Cluster set at subtree whose root is 'Carpediemonas'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0981117631763 1.000- 0.000Carpediemonas membranifera small subunit ribosomal RNA gene, complete sequence.-
1211111531153 1.000- 0.000Carpediemonas membranifera alpha-tubulin gene, partial cds.-
2311111621162 1.000- 0.000Carpediemonas membranifera beta-tubulin gene, partial cds.-
3991213871387 1.000- 0.000Carpediemonas membranifera clone 1 heat shock protein 70 (hsp70) gene, partial cds.-
410012721851 0.924- 0.000Carpediemonas membranifera carbamate kinase (CK) gene, partial cds.-
510111356356 1.000- 0.000Carpediemonas membranifera clone 1 carbamate kinase (CK) mRNA, partial cds.-
61021117561756 1.000- 0.000Carpediemonas membranifera cytosolic heat shock protein 90 (HSP90) gene, partial cds.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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