Cluster set at subtree whose root is 'Haptophyceae'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0-1110721072 1.000- 0.000Pavlova lutheri chromoplast atpA gene for ATP synthase CF1 alpha chain, partial cds.-
1-689261530 0.798- 0.000Emiliania huxleyi photosystem II 47 kDa protein (psbB) gene, complete cds; chloroplast.
2-33352483 0.819- 0.000Emiliania huxleyi cytochrome b6/f complex subunit IV (petD) gene, complete cds; chloroplast.-
3-10147471083 0.823- 0.000Emiliania huxleyi photosystem II protein D1 (psbA) gene, complete cds; chloroplast.
4-31384862640 0.462- 0.000Pleurochrysis carterae chloroplast genes for ribulose-1,5-bisphosphate carboxylase/oxygenase large and small subunits, complete cds.
5-11654654 1.000- 0.000Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA, complete cds.-
6-11840840 1.000- 0.000Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc2) mRNA, complete cds.-
7-22964973 0.995- 0.000Pavlova lutheri glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, partial cds; nuclear gene for plastid product.-
8-338201032 0.909- 0.000Prymnesium parvum glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, partial cds.-
9-1116191619 1.000- 0.000Pavlova lutheri delta-4 fatty acid desaturase (des1) mRNA, complete cds.-
10-4412421266 0.995- 0.000Isochrysis sp. SAG 927-2 photosystem I P700 chlorophyll a apoprotein A2 (psaB) gene, partial cds; chloroplast.
11-11744744 1.000- 0.000Pavlova lutheri enolase gene, partial cds.-
12-1120612061 1.000- 0.000Pavlova lutheri beta-ketoacyl-CoA synthase mRNA, complete cds.-
13-3310181670 0.777- 0.000Isochrysis galbana EF-1 alpha-like protein (efl) mRNA, complete cds.-
14-9148751530 0.715- 0.000Prymnesium parvum beta-tubulin-like gene, partial sequence.
15-111510981228 0.942- 0.000Prymnesium parvum alpha-tubulin gene, partial cds.
16-4616691893 0.923- 0.000Prymnesium parvum heat shock protein 90 gene, partial cds.
17-1113441344 1.000- 0.000Pavlova lutheri chloroplast phosphoribulokinase (PRK) mRNA, complete cds; nuclear gene for chloroplast product.-
18-1110511051 1.000- 0.000Pavlova lutheri clone PLCA1 chloroplast carbonic anhydrase mRNA, partial cds; nuclear gene for chloroplast product.-
19-11640640 1.000- 0.000Pavlova lutheri clone PLCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product.-
20-11736736 1.000- 0.000Pavlova lutheri clone PLF2 chloroplast ferredixon mRNA, partial cds; nuclear gene for chloroplast product.-
21-1113531353 1.000- 0.000Pavlova lutheri clone PLPGK1 phosphoglycerate kinase mRNA, complete cds.-
22-11721721 1.000- 0.000Pavlova lutheri clone PLDXPS1 chloroplast 1-deoxyxylulose-5-phosphate synthase mRNA, partial cds; nuclear gene for chloroplast product.-
23-11659659 1.000- 0.000Pavlova lutheri clone PLQTR1 chloroplast queuine tRNA ribosyltransferase mRNA, partial cds; nuclear gene for chloroplast product.-
24-1112901290 1.000- 0.000Pavlova lutheri S-adenosyl-L-homocysteine hydrolase (sahh) mRNA, partial cds.-
25-568881056 0.868- 0.000Emiliania huxleyi photosystem II protein D2 (psbD) gene, complete cds; chloroplast.
26-1113501350 1.000- 0.000Pavlova lutheri isolate 1689 chloroplast glutathione reductase mRNA, partial cds; nuclear gene for chloroplast product.-
27-11611611 1.000- 0.000Pavlova lutheri isolate 51 chloroplast stability factor hcf136 mRNA, partial cds; nuclear gene for chloroplast product.-
28-1110091009 1.000- 0.000Pavlova lutheri isolate 907 chloroplast phytoene synthase mRNA, partial cds; nuclear gene for chloroplast product.-
29-11546546 1.000- 0.000Pavlova lutheri isolate 776 chloroplast psaEb mRNA, partial cds; nuclear gene for chloroplast product.-
30-11638638 1.000- 0.000Pavlova lutheri isolate 487 chloroplast 50S ribosomal protein L1 mRNA, partial cds; nuclear gene for chloroplast product.-
31-11624624 1.000- 0.000Pavlova lutheri isolate 1189 chloroplast 50S ribosomal protein L7 mRNA, partial cds; nuclear gene for chloroplast product.-
32-11548548 1.000- 0.000Pavlova lutheri isolate 363 chloroplast 50S ribosomal protein L9 mRNA, partial cds; nuclear gene for chloroplast product.-
33-1111251125 1.000- 0.000Pavlova lutheri isolate 256 chloroplast 50S ribosomal protein L13 mRNA, complete cds; nuclear gene for chloroplast product.-
34-11702702 1.000- 0.000Pavlova lutheri isolate 1443 chloroplast 50S ribosomal protein L15 mRNA, complete cds; nuclear gene for chloroplast product.-
35-11325325 1.000- 0.000Pavlova lutheri isolate 1099 chloroplast 50S ribosomal protein L17 mRNA, partial cds; nuclear gene for chloroplast product.-
36-11732732 1.000- 0.000Pavlova lutheri isolate 443 chloroplast 50S ribosomal protein L24 mRNA, complete cds; nuclear gene for chloroplast product.-
37-11522522 1.000- 0.000Pavlova lutheri isolate 536 chloroplast 30S ribosomal protein S1 mRNA, partial cds; nuclear gene for chloroplast product.-
38-11664664 1.000- 0.000Pavlova lutheri isolate 990 chloroplast ribulose phosphate epimerase mRNA, partial cds; nuclear gene for chloroplast product.-
39-11658658 1.000- 0.000Pavlova lutheri isolate 3215 chloroplast sedoheptulose bisphosphatase mRNA, partial cds; nuclear gene for chloroplast product.-
40-11600600 1.000- 0.000Pavlova lutheri isolate 1614 chloroplast Ycf16-like transporter mRNA, partial cds; nuclear gene for chloroplast product.-
41-1121682168 1.000- 0.000Pavlova lutheri isolate 481 chloroplast ATP sythase gamma mRNA, complete cds; nuclear gene for chloroplast product.-
42-11650650 1.000- 0.000Pavlova lutheri isolate 1529 chloroplast O-acetyl-serine lyase mRNA, partial cds; nuclear gene for chloroplast product.-
43-11638638 1.000- 0.000Pavlova lutheri chloroplast psbU mRNA, partial cds; nuclear gene for chloroplast product.-
44-1110691069 1.000- 0.000Pavlova lutheri isolate 3028 chloroplast ribulose phosphate isomerase mRNA, partial cds; nuclear gene for chloroplast product.-
45-11603603 1.000- 0.000Pavlova lutheri glutamate-1-semialdehyde aminomutase mRNA, partial cds.-
46-11483483 1.000- 0.000Pavlova lutheri protease/amidase mRNA, partial cds.-
47-1118991899 1.000- 0.000Pavlova lutheri cytosolic glucose-6-phosphate isomerase (GPI) mRNA, complete cds.-
48-1122192219 1.000- 0.000P.lutherii hsp70 gene for 70 kd heat shock protein.-
49-11465465 1.000- 0.000P.lutherii chloroplast DNA of atpI and atpH genes for subunit of ATPase complex.-
50-1122802280 1.000- 0.000P.lutherii chloroplast secY gene.-
51-1136783678 1.000- 0.000P.lutherii chloroplast secA gene, orf93 and orf42.-
52-1137643764 1.000- 0.000Pavlova lutheri cytochrome oxidase subunit I (coxI) gene, partial cds; and reverse transcriptase homolog gene, complete cds; mitochondrial genes for mitochondrial products.-
53-1642572881818 0.885- 0.000Chrysochromulina parkeae partial 18S rRNA gene, strain Kawachi, Japan.
54-37456961485 0.648- 0.000Isochrysis sp. plastid 16S rRNA gene.
55-15255256 0.999- 0.000Emiliania huxleyi E-2 mRNA for iron transporter like.-
56-12260260 1.000- 0.000Emiliania huxleyi E-6 mRNA for iron transporter like.-
57-11244244 1.000- 0.000Emiliania huxleyi E-8 mRNA for iron transporter like.-
58-11251251 1.000- 0.000Emiliania huxleyi E-9 mRNA for iron transporter like.-
59-11800800 1.000- 0.000Emiliania huxleyi Ehsep2 mRNA for putative protein disulfide isomerase precursor, complete cds.-
60-8912222259 0.649- 0.000Emiliania huxleyi photosystem I P700 apoprotein A1 (psaA) gene, complete cds; chloroplast.
61-1110001000 1.000- 0.000Emiliania huxleyi fucoxanthin chlorophyll a/c binding protein-like mRNA, partial sequence; nuclear gene for chloroplast product.-
62-11629629 1.000- 0.000Emiliania huxleyi cytochrome oxidase subunit II (Cox2) gene, partial cds; mitochondrial.-
63-135116513 0.693- 0.000Emiliania huxleyi strain 92E putative calcium binding protein (gpa) mRNA, partial cds.-
64-3310721500 0.810- 0.000Emiliania huxleyi ATP synthase F1 alpha subunit (atpA) gene, complete cds; chloroplast.-
65-448321867 0.664- 0.000Ochrosphaera neapolitana plastid atpB gene cluster.
66-33427648 0.811- 0.000Emiliania huxleyi cytochrome b6 (petB) gene, complete cds; chloroplast.-
67-788971416 0.749- 0.000Emiliania huxleyi photosystem II 44 kDa protein (psbC) gene, complete cds; chloroplast.
68-11258258 1.000- 0.000Emiliania huxleyi cytochrome b559 alpha chain (psbE) gene, partial cds; chloroplast.-
69-11624624 1.000- 0.000Emiliania huxleyi ribosomal protein L3 (rpl3) gene, complete cds; chloroplast.-
70-11153153 1.000- 0.000Emiliania huxleyi ribosomal protein L33 (rpl33) gene, partial cds; chloroplast.-
71-1124542454 1.000- 0.000Emiliania huxleyi Clp protease ATP binding subunit (clpC) gene, complete cds; chloroplast.-
72-11138138 1.000- 0.000Emiliania huxleyi photosystem II protein K (psbK) gene, complete cds; chloroplast.-
73-11246246 1.000- 0.000Emiliania huxleyi photosystem I subunit VII (psaC) gene, complete cds; chloroplast.-
74-11690690 1.000- 0.000Emiliania huxleyi ribosomal protein S2 (rps2) gene, complete cds; chloroplast.-
75-11702702 1.000- 0.000Emiliania huxleyi ATP synthase CF0 A chain (atpI) gene, complete cds; chloroplast.-
76-11249249 1.000- 0.000Emiliania huxleyi ATP synthase CF0 C chain (atpH) gene, complete cds; chloroplast.-
77-11489489 1.000- 0.000Emiliania huxleyi ATP synthase CF0 beta' chain (atpG) gene, complete cds; chloroplast.-
78-1110561056 1.000- 0.000Emiliania huxleyi Mg-protoporyphyrin IX chelatase (chlI) gene, complete cds; chloroplast.-
79-11117117 1.000- 0.000Emiliania huxleyi photosystem II protein L (psbL) gene, complete cds; chloroplast.-
80-11555555 1.000- 0.000Emiliania huxleyi photosystem I subunit III (psaF) gene, complete cds; chloroplast.-
81-11429429 1.000- 0.000Emiliania huxleyi photosystem I subunit II (psaD) gene, complete cds; chloroplast.-
82-11613613 1.000- 0.000Emiliania huxleyi histone H2A.X mRNA, complete cds.-
83-11680680 1.000- 0.000Emiliania huxleyi histone H2A mRNA, complete cds.-
84-1365055 0.963- 0.000Emiliania huxleyi strain OTUSR15 calcium binding protein gene, 3' UTR.-
85-1124562456 1.000- 0.000Emiliania huxleyi delta-carbonic anhydrase mRNA, complete cds.-
86-1111251125 1.000- 0.000Emiliania huxleyi gamma carbonic anhydrase mRNA, complete cds.-
87-1116951695 1.000- 0.000Emiliania huxleyi cytosolic glucose-6-phosphate isomerase (GPI) mRNA, partial cds.-
88-1128402840 1.000- 0.000Emiliania huxleyi alkaline phosphatase (ap1) mRNA, complete cds.-
89-12650975 0.833- 0.000Emiliania huxleyi isolate 2 NRT2 (Nrt2) gene, partial cds.-
90-8206291095 0.782- 0.000Pleurochrysis carterae clone PAC11 type 2 actin mRNA, partial cds.
91-1114581458 1.000- 0.000Emiliania huxleyi putative calcium binding protein (gpa) mRNA, complete cds.-
92-1117671767 1.000- 0.000Emiliania huxleyi phosphate repressible phosphate permease mRNA, complete cds.-
93-53647471039 0.736- 0.000Cricosphaera roscoffensis tufA gene for translation elongation factor Tu, partial cds.
94-1138253825 1.000- 0.000Emiliania huxleyi EhPYC mRNA for pyruvate carboxylase, complete cds.-
95-1130363036 1.000- 0.000Emiliania huxleyi EhPEPC mRNA for phosphoenolpyruvate carboxylase, complete cds.-
96-1119501950 1.000- 0.000Emiliania huxleyi EhSEP1 mRNA for thioredoxin reductase, complete cds.-
97-11209209 1.000- 0.000Emiliania huxleyi putative formamidase mRNA, partial cds.-
98-23396411 0.978- 0.000Emiliania huxleyi strain CCMP 1516 assimilatory nitrate reductase mRNA, partial cds.-
99-80109456893 0.796- 0.000Rebecca salina strain RCC1545 28S ribosomal RNA gene, partial sequence.
100-16559618 0.984- 0.000Emiliania huxleyi strain CCMP1516 serine palmitoyltransferase (SPT) gene, partial cds.-
101-16415646 0.940- 0.000Emiliania huxleyi strain OS2 putative dihydroceramide desaturase (Dsd1) gene, partial cds.-
102-15390390 1.000- 0.000Emiliania huxleyi strain CCMP374 putative dihydroceramide synthase (LAG1) gene, partial cds.-
103-15405451 0.980- 0.000Emiliania huxleyi strain CCMP370 fatty acid desaturase (ACO1) gene, partial cds.-
104-16467467 1.000- 0.000Emiliania huxleyi strain CCMP1516 sphingosine 1-phosphate phosphatase (SGPP1) gene, partial cds.-
105-14602754 0.950- 0.000Emiliania huxleyi strain CCMP374 putative 3-ketosphinganine reductase gene, partial cds.-
106-55378562 0.888- 0.000Chrysochromulina sp. G3-53-A2 partial 18S rRNA gene, clone G3-53-A2.
107-17164164 1.000- 0.000Emiliania huxleyi strain TWI beta-tubulin (TUBB) gene, partial cds.-
108-220252366 0.710- 0.000Gephyrocapsa oceanica mitochondrial COXI gene for cytochrome oxidase subunit I, partial cds.-
109-1110591059 1.000- 0.000Isochrysis galbana mitochondrial COXI gene for cytochrome oxidase subunit I, partial cds.-
110-1111631163 1.000- 0.000Isochrysis galbana mRNA for putative carboxylic ester hydrolase family protein (CEHfp gene).-
111-1121122112 1.000- 0.000Isochrysis galbana mRNA for putative class 3 lipase (lip gene), strain CCAP 927/1.-
112-1112441244 1.000- 0.000Isochrysis galbana CCMP1323 oxygen evolving enhancer 1 precursor (psbO) mRNA, complete cds; nuclear gene for plastid product.-
113-1111221122 1.000- 0.000Isochrysis galbana enolase gene, partial cds.-
114-1113021302 1.000- 0.000Isochrysis galbana strain CCMP1323 delta-4 desaturase mRNA, complete cds.-
115-1113941394 1.000- 0.000Isochrysis galbana cytosolic class II fructose bisphosphate aldolase (fbaCY) mRNA, complete cds.-
116-1113641364 1.000- 0.000Isochrysis galbana plastid C1 class II fructose bisphosphate aldolase (fbaC1) mRNA, complete cds; nuclear gene for plastid product.-
117-11794794 1.000- 0.000Isochrysis galbana clone ISACP1 mitochondrial acyl carrier protein mRNA, partial cds; nuclear gene for mitochondrial product.-
118-11537537 1.000- 0.000Isochrysis galbana clone ISACP2 chloroplast acyl carrier protein mRNA, complete cds; nuclear gene for chloroplast product.-
119-11634634 1.000- 0.000Isochrysis galbana clone ISAK1 adenylate kinase mRNA, partial cds.-
120-11560560 1.000- 0.000Isochrysis galbana clone ISAK2 adenylate kinase mRNA, partial cds.-
121-1111231123 1.000- 0.000Isochrysis galbana clone ISAP1 ascorbate peroxidase mRNA, partial cds.-
122-11900900 1.000- 0.000Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma subunit mRNA, partial cds; nuclear gene for chloroplast product.-
123-11726726 1.000- 0.000Isochrysis galbana clone ISCA1 carbonic anhydrase mRNA, partial cds.-
124-1110101010 1.000- 0.000Isochrysis galbana clone ISCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product.-
125-11764764 1.000- 0.000Isochrysis galbana clone ISF1 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product.-
126-11582582 1.000- 0.000Isochrysis galbana clone ISF2 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product.-
127-1211961196 1.000- 0.000Isochrysis galbana isolate 1491 chloroplast ferredoxin dependent NADH oxireductase mRNA, partial cds; nuclear gene for chloroplast product.-
128-1114211421 1.000- 0.000Isochrysis galbana clone ISGG1 chloroplast geranylgeranyl reductase/hydrogenase mRNA, complete cds; nuclear gene for chloroplast product.-
129-1111141114 1.000- 0.000Isochrysis galbana clone ISMD1 malate dehydrogenase mRNA, partial cds.-
130-1114321432 1.000- 0.000Isochrysis galbana clone ISPRK1 chloroplast phosphoribulokinase mRNA, partial cds; nuclear gene for chloroplast product.-
131-1115091509 1.000- 0.000Isochrysis galbana clone ISPGK1 phosphoglycerate kinase mRNA, complete cds.-
132-1114841484 1.000- 0.000Isochrysis galbana clone ISPGK2 chloroplast phosphoglycerate kinase mRNA, partial cds; nuclear gene for chloroplast product.-
133-1113161316 1.000- 0.000Isochrysis galbana clone ISBGK1 chloroplast beta-keto acyl reductase mRNA, complete cds; nuclear gene for chloroplast product.-
134-11396396 1.000- 0.000Isochrysis galbana clone ISCC61 chloroplast cytochrome c6 mRNA, partial cds; nuclear gene for chloroplast product.-
135-11529529 1.000- 0.000Isochrysis galbana clone IGDMS1 chloroplast dimethyladenosine synthase mRNA, partial cds; nuclear gene for chloroplast product.-
136-11372372 1.000- 0.000Isochrysis galbana clone IGPSAE1 chloroplast photosystem I protein E mRNA, partial cds; nuclear gene for chloroplast product.-
137-11511511 1.000- 0.000Isochrysis galbana clone ISPSAL1 chloroplast photosystem I subunit XI mRNA, complete cds; chloroplast.-
138-11453453 1.000- 0.000Isochrysis galbana clone ISPSBU1 chloroplast photosystem II 12 kDa extrinsic protein mRNA, partial cds; nuclear gene for chloroplast product.-
139-11689689 1.000- 0.000Isochrysis galbana clone IGRPI1 chloroplast ribose-5-phosphate isomerase mRNA, partial cds; nuclear gene for chloroplast product.-
140-11663663 1.000- 0.000Isochrysis galbana isolate 7370 chloroplast ATP sulfurylase mRNA, partial cds; nuclear gene for chloroplast product.-
141-1114501450 1.000- 0.000Isochrysis galbana isolate 168 chloroplast chlorophyll synthase mRNA, partial cds; nuclear gene for chloroplast product.-
142-1110861086 1.000- 0.000Isochrysis galbana isolate 1315 chloroplast coproporphyrinogen III oxidase mRNA, partial cds; nuclear gene for chloroplast product.-
143-11497497 1.000- 0.000Isochrysis galbana isolate 440 chloroplast ALA dehydratase mRNA, partial cds; nuclear gene for chloroplast product.-
144-11639639 1.000- 0.000Isochrysis galbana isolate 7980 chloroplast peptide deformylase mRNA, partial cds; nuclear gene for chloroplast product.-
145-11753753 1.000- 0.000Isochrysis galbana isolate 4545 chloroplast 50S ribosomal protein L9 mRNA, complete cds; nuclear gene for chloroplast product.-
146-11790790 1.000- 0.000Isochrysis galbana isolate 1510 chloroplast 50S ribosomal protein L12 mRNA, complete cds; nuclear gene for chloroplast product.-
147-11489489 1.000- 0.000Isochrysis galbana isolate 7216 chloroplast 50S ribosomal protein L17 mRNA, partial cds; nuclear gene for chloroplast product.-
148-11644644 1.000- 0.000Isochrysis galbana isolate 1056 chloroplast 50S ribosomal protein L24 mRNA, complete cds; nuclear gene for chloroplast product.-
149-11588588 1.000- 0.000Isochrysis galbana isolate 6516 chloroplast 50S ribosomal protein L35 mRNA, complete cds; nuclear gene for chloroplast product.-
150-1115511551 1.000- 0.000Isochrysis galbana isolate 3717 chloroplast mRNA binding protein csp41 mRNA, partial cds; nuclear gene for chloroplast product.-
151-1115511551 1.000- 0.000Isochrysis galbana isolate 4150 chloroplast O-acetyl-serine lyase mRNA, partial cds; nuclear gene for chloroplast product.-
152-11689689 1.000- 0.000Isochrysis galbana isolate 8135 chloroplast O-acetyl-serine lyase mRNA, partial cds; nuclear gene for chloroplast product.-
153-11755755 1.000- 0.000Isochrysis galbana isolate 385 chloroplast light harvesting protein isoform 1 mRNA, complete cds; nuclear gene for chloroplast product.-
154-11720720 1.000- 0.000Isochrysis galbana isolate 1533 chloroplast light harvesting protein isoform 2 mRNA, complete cds; nuclear gene for chloroplast product.-
155-12718747 0.981- 0.000Isochrysis galbana isolate 6 chloroplast light harvesting protein isoform 4 mRNA, complete cds; nuclear gene for chloroplast product.-
156-11775775 1.000- 0.000Isochrysis galbana isolate 1517 chloroplast light harvesting protein isoform 5 mRNA, complete cds; nuclear gene for chloroplast product.-
157-11618618 1.000- 0.000Isochrysis galbana isolate 47 chloroplast light harvesting protein isoform 6 mRNA, partial cds; nuclear gene for chloroplast product.-
158-11761761 1.000- 0.000Isochrysis galbana isolate 35 chloroplast light harvesting protein isoform 7 mRNA, complete cds; nuclear gene for chloroplast product.-
159-11794794 1.000- 0.000Isochrysis galbana isolate 492 chloroplast light harvesting protein isoform 8 mRNA, complete cds; nuclear gene for chloroplast product.-
160-11787787 1.000- 0.000Isochrysis galbana isolate 1461 chloroplast light harvesting protein isoform 9 mRNA, complete cds; nuclear gene for chloroplast product.-
161-11679679 1.000- 0.000Isochrysis galbana isolate 888 chloroplast light harvesting protein isoform 10 mRNA, complete cds; nuclear gene for chloroplast product.-
162-11639639 1.000- 0.000Isochrysis galbana isolate 1347 chloroplast light harvesting protein isoform 11 mRNA, complete cds; nuclear gene for chloroplast product.-
163-11919919 1.000- 0.000Isochrysis galbana isolate 1478 chloroplast light harvesting protein isoform 12 mRNA, complete cds; nuclear gene for chloroplast product.-
164-11714714 1.000- 0.000Isochrysis galbana isolate 7 chloroplast light harvesting protein isoform 13 mRNA, complete cds; nuclear gene for chloroplast product.-
165-11612612 1.000- 0.000Isochrysis galbana isolate 5 chloroplast light harvesting protein isoform 14 mRNA, complete cds; nuclear gene for chloroplast product.-
166-11697697 1.000- 0.000Isochrysis galbana isolate 53 chloroplast light harvesting protein isoform 15 mRNA, complete cds; nuclear gene for chloroplast product.-
167-11907907 1.000- 0.000Isochrysis galbana chloroplast clp protease P mRNA, complete cds; nuclear gene for chloroplast product.-
168-11360360 1.000- 0.000Isochrysis galbana enoyl-CoA hydratase mRNA, partial cds.-
169-11549549 1.000- 0.000Isochrysis galbana enoyl-CoA hydratase-like protein mRNA, partial cds.-
170-11448448 1.000- 0.000Isochrysis galbana nitrate transporter mRNA, partial sequence.-
171-11602602 1.000- 0.000Isochrysis galbana ammonium transporter mRNA, partial sequence.-
172-11802802 1.000- 0.000Isochrysis galbana glutamine synthetase mRNA, partial sequence.-
173-1123612361 1.000- 0.000Isochrysis galbana putative plastid transketolase mRNA, complete cds; nuclear gene for plastid product.-
174-1110001000 1.000- 0.000Isochrysis galbana glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, partial cds.-
175-1110701070 1.000- 0.000I. galbana lambda-IGFcp1 mRNA for fucoxanthin.-
176-11576576 1.000- 0.000Isochrysis galbana proliferating cell nuclear antigen (PCNA) mRNA, partial cds.-
177-11191191 1.000- 0.000Isochrysis galbana cyclin (CYCL) gene, partial cds.-
178-11609609 1.000- 0.000Isochrysis galbana cell division protein kinase 2 (ISOCDC2) mRNA, partial cds.-
179-1110641064 1.000- 0.000Isochrysis galbana long chain polyunsaturated fatty acid elongation enzyme (ASE1) mRNA, complete cds.-
180-11624624 1.000- 0.000Isochrysis galbana partial vppII gene for proton-translocating inorganic pyrophosphatase.-
181-11582582 1.000- 0.000Isochrysis galbana partial vppI gene for proton-translocating inorganic pyrophosphatase.-
182-1111041104 1.000- 0.000Isochrysis galbana mRNA for putative phospholipase/carboxylesterase (plcep gene).-
183-12682685 0.998- 0.000Isochrysis galbana strain CCMP 1323 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
184-24691711 0.986- 0.000Isochrysis galbana strain Ifremer-Argenton98 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
185-11408408 1.000- 0.000Isochrysis galbana strain PCC 565 assimilatory nitrate reductase (NR) gene, partial cds.-
186-11570570 1.000- 0.000Gephyrocapsa oceanica putative mitochondrial division protein (FtsZ) gene, partial cds; nuclear gene for mitochondrial product.-
187-11484484 1.000- 0.000Isochrysis sp. putative T3/T7-like RNA polymerase gene, partial cds.-
188-4529604019 0.811- 0.000Prymnesium patelliferum internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence.
189-2210641068 0.998- 0.000Pseudoisochrysis paradoxa urease alpha subunit (ureC) gene, partial cds.-
190-11226226 1.000- 0.000Calyptrosphaera sphaeroidea chloroplast rpl27 gene for ribosomal protein L27, partial cds.-
191-1110591059 1.000- 0.000Diacronema vlkianum mitochondrial COXI gene for cytochrome c oxidase subunit I, partial cds.-
192-22756857 0.941- 0.000Prymnesium patelliferum heat shock protein 90 (Hsp90) gene, partial cds.-
193-11834834 1.000- 0.000Pavlova sp. CCMP459 C20-polyunsaturated fatty acid elongating enzyme (ELO) mRNA, complete cds.-
194-1112281228 1.000- 0.000Pavlova viridis C20 elongase (ELKJ) mRNA, complete cds.-
195-1117591759 1.000- 0.000Pavlova viridis chloroplast acyl-ACP desaturase (fadA) mRNA, complete cds; nuclear gene for chloroplast product.-
196-1113521352 1.000- 0.000Diacronema sp. CCMP610 strain CCMP 610 28S ribosomal RNA gene, partial sequence.-
197-22223223 1.000- 0.000Chrysochromulina alifera chloroplast rpl27 gene for ribosomal protein L27, partial cds.-
198-11369369 1.000- 0.000Chrysochromulina fragaria first internal transcribed spacer flanked by 18S and 5.8S rRNA genes, strain S19.-
199-11467467 1.000- 0.000Chrysochromulina sp. CCMP1204 first internal transcribed spacer flanked by 18S and 5.8S rRNA genes, strain CCMP 1204.-
200-11902902 1.000- 0.000Prymnesium parvum mRNA for eucaryotic release factor, partial cds.-
201-11653653 1.000- 0.000Prymnesium parvum mRNA for 40S ribosome protein, partial cds.-
202-11687687 1.000- 0.000Prymnesium parvum mRNA for enolase, partial cds.-
203-11593593 1.000- 0.000Prymnesium parvum mRNA for heat shock protein, partial cds.-
204-11659659 1.000- 0.000Prymnesium parvum mRNA for enolase, partial cds.-
205-12712716 0.997- 0.000Prymnesium parvum strain ZB1101 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.-
206-1110211021 1.000- 0.000Prymnesium parvum malonyl-CoA:ACP transacylase (fabD) gene, partial cds; nuclear gene for plastid product.-
207-1118711871 1.000- 0.000Prymnesium parvum enolase gene, partial cds.-
208-1116351635 1.000- 0.000Prymnesium parvum chloroplast phosphoribulokinase (PRK) gene, complete cds; nuclear gene for chloroplast product.-
209-1118501850 1.000- 0.000Prymnesium parvum chloroplast sedoheptulose-1,7-bisphosphatase (SBP) gene, complete cds; nuclear gene for chloroplast product.-
210-1125322532 1.000- 0.000Prymnesium parvum chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor (DXR) gene, complete cds; nuclear gene for chloroplast product.-
211-11245245 1.000- 0.000Prymnesium parvum tmRNA proteolysis tag (ssrA) gene, partial cds; plastid gene for plastid product.-
212-111251257 0.988- 0.000Prymnesium parvum strain UTEX_LB_995 internal transcribed spacer 1, partial sequence.-
213-11558558 1.000- 0.000Prymnesium parvum f. patelliferum partial 28S rRNA gene, strain RS2pat94.-
214-11545545 1.000- 0.000Imantonia rotunda partial mRNA for actin, contig 15964.-
215-11437437 1.000- 0.000Imantonia rotunda partial mRNA for ADP-ribosylation factor 3, contig 10068.-
216-11366366 1.000- 0.000Imantonia rotunda partial mRNA for AP-1 complex subunit mu-1, contig 11282.-
217-11228228 1.000- 0.000Imantonia rotunda partial mRNA for V-type proton ATPase 16 kDa proteolipid subunit, contig 01969.-
218-11427427 1.000- 0.000Imantonia rotunda partial mRNA for calmodulin, contig 03038.-
219-11444444 1.000- 0.000Imantonia rotunda partial mRNA for calreticulin, contig 15365.-
220-11642642 1.000- 0.000Imantonia rotunda partial mRNA for tubulin beta, contig 03066.-
221-11241241 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein SA, contig 07963.-
222-11238238 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S15a, contig 11904.-
223-11237237 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S18, contig 12721.-
224-11298298 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S15, contig 01054.-
225-11236236 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S14, contig 05352.-
226-11422422 1.000- 0.000Imantonia rotunda partial mRNA for 60S acidic ribosomal protein P0, contig 01758.-
227-11419419 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S2, contig 25843.-
228-11455455 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S4, contig 03105.-
229-11137137 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S9, contig 10083.-
230-11241241 1.000- 0.000Imantonia rotunda partial mRNA for 40S ribosomal protein S10, contig 20133.-
231-11239239 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L18a, contig 04449.-
232-11485485 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L19, contig 25573.-
233-11385385 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L17, contig 01757.-
234-11224224 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L13a, contig 02955.-
235-11234234 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L3, contig 19007.-
236-11233233 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L10a, contig 04439.-
237-11236236 1.000- 0.000Imantonia rotunda partial mRNA for proteasome subunit beta type-6, contig 03526.-
238-11208208 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L7a, contig 13985.-
239-11217217 1.000- 0.000Imantonia rotunda partial mRNA for histone H3.2, contig 01798.-
240-11241241 1.000- 0.000Imantonia rotunda partial mRNA for 60S ribosomal protein L10, contig 02549.-
241-11238238 1.000- 0.000Imantonia rotunda partial mRNA for guanine nucleotide-binding protein G(o) subunit alpha, contig 04219.-
242-11390390 1.000- 0.000Imantonia rotunda partial mRNA for guanine nucleotide-binding protein subunit beta-2-like 1, contig 15549.-
243-11629629 1.000- 0.000Imantonia rotunda partial mRNA for rRNA 2'-O-methyltransferase fibrillarin, contig 08653.-
244-11656656 1.000- 0.000Imantonia rotunda partial mRNA for T-complex protein 1 subunit epsilon, contig 02106.-
245-11512512 1.000- 0.000Chrysoculter rhomboideus chloroplast rbcL gene for ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial cds.-
246-1119111911 1.000- 0.000Pleurochrysis carterae st1 mRNA for hypothetical protein, complete cds.-
247-1113931393 1.000- 0.000Pleurochrysis carterae st2 mRNA for fucoxanthin chlorophyll a/c binding protein, complete cds.-
248-11391391 1.000- 0.000Pleurochrysis carterae fucoxanthin chlorophyll a/c binding protein mRNA, partial cds; nuclear gene for chloroplast product.-
249-11573573 1.000- 0.000Pleurochrysis carterae putative mitochondrial division protein (FtsZ) gene, partial cds; nuclear gene for mitochondrial product.-
250-11480480 1.000- 0.000Pleurochrysis carterae chloroplast rpl27 gene for ribosomal protein L27, complete cds.-
251-136681378 0.710- 0.000Pleurochrysis carterae vacuolar-type H(+)-ATPase incompletely processed mRNA, complete cds.-
252-12915971 0.971- 0.000Pleurochrysis carterae proliferating cell nuclear antigen (PCNA) mRNA, transcript 1, partial cds.-
253-11188188 1.000- 0.000Pleurochrysis carterae cyclin (cycl) mRNA, partial cds.-
254-1120412041 1.000- 0.000Pleurochrysis carterae proliferating cell nuclear antigen (pcna) gene, partial cds.-
255-22892895 0.998- 0.000Pleurochrysis carterae partial 18S rRNA gene, ITS1, 5.8S rRNA gene and partial ITS2, strain HAP1.-
256-11785785 1.000- 0.000Pleurochrysis carterae strain CCMP 874 28S ribosomal RNA gene, partial sequence.-
257-11848848 1.000- 0.000Pleurochrysis carterae strain CCMP 874 actin (act) gene, partial cds.-
258-1112441244 1.000- 0.000Pleurochrysis haptonemofera mRNA for putative beta-type carbonic anhydrase, partial cds, clone: A-15-10.-
259-1110981098 1.000- 0.000Pleurochrysis haptonemofera mRNA for putative beta-type carbonic anhydrase, partial cds, clone: H-17-16.-
260-11226226 1.000- 0.000Pleurochrysis haptonemofera chloroplast rpl27 gene for ribosomal protein L27, partial cds.-
261-2214611461 1.000- 0.000Pleurochrysis elongata partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA gene, strain HAP79.-
262-2214241424 1.000- 0.000Pleurochrysis roscoffensis partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA gene, strain HAP32.-
263-1211581197 0.984- 0.000Haptophyceae sp. W5-1 clone C1 beta tubulin (btub) mRNA, partial cds.-
264-13447447 1.000- 0.000Phaeocystis antarctica isolate RS-24 16S ribosomal RNA gene, partial sequence; chloroplast.-
265-11596596 1.000- 0.000Phaeocystis antarctica internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.-
266-312691985 0.897- 0.000Phaeocystis pouchetii 18S rRNA gene (partial), 5.8S rRNA gene, 25S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain P3613 (clone 3).-
267-11342342 1.000- 0.000Phaeocystis globosa strain CCMP 2754 assimilatory nitrate reductase mRNA, partial cds.-
268-1110591059 1.000- 0.000Phaeocystis pouchetii mitochondrial COXI gene for cytochrome oxidase subunit I, partial cds.-
269-1129482948 1.000- 0.000Ochrosphaera neapolitana plastid 16S rRNA, tRNA(Ile), tRNA(Ala) and 23S rRNA (partial) genes.-
270-1143964396 1.000- 0.000Ochrosphaera neapolitana plastid atpA gene cluster.-
271-22366366 1.000- 0.000Cricosphaera roscoffensis mitochondrial COXI gene for cytochrome oxidase subunit I, partial cds.-
272-22782784 0.999- 0.000Coccolithus pelagicus ITS1, 5.8S rRNA gene and ITS2, isolate KL2.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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