Cluster set at subtree whose root is 'unclassified Oxymonadida'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0212570573 0.997- 0.000Symbiotic protist of Reticulitermes speratus RsSmRab1_4 mRNA for Small G Protein RAB, partial cds.-
14111579579 1.000- 0.000Symbiotic protist of Reticulitermes speratus RsSmRab1_5 mRNA for Small G Protein RAB, partial cds.-
24212574577 0.997- 0.000Symbiotic protist of Reticulitermes speratus RsSmRab2_2 mRNA for Small G Protein RAB, partial cds.-
34311584584 1.000- 0.000Symbiotic protist of Reticulitermes speratus RsSmRab5 mRNA for Small G Protein RAB, partial cds.-
4513616619 0.997- 0.000Symbiotic protist of Reticulitermes speratus RsSmRab6_4 mRNA for Small G Protein RAB, partial cds.-
5612588590 0.998- 0.000Symbiotic protist of Reticulitermes speratus RsSmRab7_8 mRNA for Small G Protein RAB, partial cds.-
6712595601 0.995- 0.000Symbiotic protist of Reticulitermes speratus RsSmRab11_2 mRNA for Small G Protein RAB, partial cds.-
76011954954 1.000- 0.000Incisitermes marginipennis oxymonad symbiont clone GhImp29 partial 18S rRNA gene, clone GhImp29.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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