Cluster set at subtree whose root is 'Mimosoideae'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
1204134166297501 0.836- 0.000Acacia synchronicia isolate S68 external transcribed spacer and small subunit ribosomal RNA gene, partial sequence.
282293240506559 0.938- 0.000Prosopis palmeri glyceraldehyde 3-phosphate dehydrogenase (G3pdh) gene, partial cds.
292303341417421 0.997- 0.000Xerocladia viridiramis trnS-psbC intergenic spacer, partial sequence; and PsbC (psbC) gene, partial cds; chloroplast.
301171813681461 0.955- 0.000Parkia roxburghii ribulose 1,5-bisphosphate carboxylase-oxygenase large subunit (rbcL) gene, choloroplast gene encoding chloroplast protein, partial cds.
3104277012913380 0.460- 0.000Acacia schweinfurthii chloroplast trnK gene, intron sequence; and maturase-like sequence.
33253234774271977 0.458- 0.000Acacia usumacintensis tRNA-Leu gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe gene, partial sequence; chloroplast.
3429205354155627 0.706- 0.000Vachellia macracantha voucher JM1346 psbA gene, partial sequence; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast.
352323838425477 0.962- 0.000Faidherbia albida histone H3-D gene, partial cds.
3723455101109 0.967- 0.000Acacia drummondii trnL-trnF intergenic spacer region, chloroplast sequence.
382353101030397729 0.863- 0.000Acacia pachyacra isolate S45 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.-
39163149337703 0.876- 0.000Acacia exuvialis voucher RL1412 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast.
41255978399505 0.857- 0.000Albizia julibrissin tRNA-Leu (trnL) gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe (trnF) gene, partial sequence; chloroplast.
42236697212852204 0.966- 0.000Acacia melanoxylon voucher CANB 615580_JM289 AtpB (atpB) gene and atpB-rbcL intergenic spacer, partial sequence; chloroplast.
431414445566748 0.953- 0.000Senegalia picachensis voucher DS15981_JM1307 NADH dehydrogenase-like protein (ndhF) gene, partial cds; chloroplast.
442371056283326 0.875- 0.000Acacia farnesiana isolate 12-AF01 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence.
56414176102208 0.841- 0.000Inga maritima plastid accD gene for acetyl-CoA carboxylase beta subunit, isolate EDNA06-04172.
57304068171487 0.753- 0.000Zygia racemosa voucher NH200459 RNA polymerase beta subunit gene, partial cds; chloroplast.
583184182416583 0.837- 0.000Pseudopiptadenia psilostachya voucher NL110284 RNA polymerase C (rpoC1) gene, partial cds; chloroplast.
59431625224272 0.897- 0.000Zygia racemosa voucher NH200459 Ycf5 gene, partial cds; chloroplast.
60421226272394 0.918- 0.000Inga edulis plastid ndhJ gene for NADH dehydrogenase, isolate EDNA06-00038.
61671321323851 0.770- 0.000Inga sapindoides isolate EDNA06-00049 ATPase subunit I (atpF) gene, partial cds; and atpF-atpH intergenic spacer and ATPase subunit III (atpH) gene, complete sequence; chloroplast.
622582540168242 0.877- 0.000Acacia exuvialis voucher OM260 psbK-psbI intergenic spacer, partial sequence.
712621720385513 0.897- 0.000Leucaena leucocephala voucher J.R. Abbott 24948 (FLAS) trnH gene, partial sequence trnH-psbA intergenic spacer, complete sequence and psbA gene, partial sequence; chloroplast.
772681414305314 0.994- 0.000Prosopis affinis trnT-trnD intergenic spacer, partial sequence.
2664515690410841487 0.921- 0.000Inga umbellifera voucher K.G. Dexter & F. Para 495 trnT-trnE intergenic spacer, partial sequence; tRNA-Glu (trnE) gene, trnE-trnY intergenic spacer, tRNA-Tyr (trnY) gene, and trnY-trnD intergenic spacer, complete sequence; and tRNA-Asp (trnD) gene, partial sequence; chloroplast.
26745237396581007 0.841- 0.000Inga umbellifera ndhF-rpl32 intergenic spacer, partial sequence; chloroplast.
268263032637903 0.926- 0.000Inga cocleensis ribosomal protein S16 (rps16) gene, intron; chloroplast.
269642852885981534 0.919- 0.000Mimosa occidentalis var. occidentalis voucher Simon MF 821 trnD-trnT intergenic spacer, partial sequence; chloroplast.
30449833134700785 0.954- 0.000Leucaena pulverulenta 1593 RAPD fragment 23L.
3054991314560634 0.953- 0.000Leucaena pueblana 1648 clone a RAPD fragment A9.
3065004258534642 0.896- 0.000Leucaena hybrid Hughes 2055 tRNA-Lys (trnK) gene, partial sequence; chloroplast.
3195271919153224 0.897- 0.000Prosopis argentina internal transcribed spacer 2, partial sequence.
3225062331343596 0.963- 0.000Prosopis articulata nitrate reductase (NIA) gene, partial cds.
3425261718225393 0.633- 0.000Prosopis pallida voucher AMWF10 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
3435281414352375 0.958- 0.000Acacia aroma trnT-trnD intergenic spacer, partial sequence.
34452944473549 0.905- 0.000Prosopis africana tRNA-Lys (trnK) gene, intron; and maturase K (matK) gene, partial cds; chloroplast.

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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