Cluster set at subtree whose root is 'Rhizaria'

Click here to see taxon by cluster Data Availability Matrix
Cluster IDParent clusterTaxIDsGIsLminLmaxMAD1Q2Tcfi3Defline of longest sequenceTree4
0-19388241043 0.852- 0.000Borelis schlumbergeri partial 18S rRNA gene, isolate 365, clone 16.
1-415315932744 0.726- 0.000Borelis schlumbergeri 18S rRNA gene, isolate 191.
2-83155490545 0.951- 0.000Amphisorus hemprichii partial 18S rRNA gene, isolate EL61_1329j.
3-631586191497 0.657- 0.000Allogromia sp. A clone Alo159_5 actin type 2 gene, partial cds.
4-34691561108 0.355- 0.000Cercomonas ATCC50316 isolate pub4 polyubiquitin gene, partial cds.
5-11510161048 0.988- 0.000Globigerinoides sacculifer gene for 18S rRNA, partial sequence, isolate: OKI_4_1.-
6-33153511048 0.616- 0.000Globigerinoides conglobatus gene for 18S rRNA, partial sequence, isolate: OKI_2_1.-
7-13322417 0.911- 0.000Globigerinoides ruber partial 18S rRNA gene, isolate Typ_Ia_1777.-
8-11159159 1.000- 0.000Globigerinoides ruber partial 18S rRNA gene, isolate Type_pink_0065.-
9-11473981059 0.773- 0.000G.siphonifera SSU rRNA gene (partial).
10-12196248 0.895- 0.000Globigerinella siphonifera partial 18S rRNA gene.-
11-113955989 0.989- 0.000Orbulina universa gene for 18S rRNA, partial sequence, isolate: OKI_3_1.-
12-3333426453 0.973- 0.000Orbulina sp. SSU rRNA gene, partial (isolate A495).
13-1127782778 1.000- 0.000Elphidium excavatum isolate 6009 small subunit ribosomal RNA gene, complete sequence.-
14-9149851788 0.685- 0.000R.filosa mRNA for beta-tubulin, clone b472.
15-11966966 1.000- 0.000Quinqueloculina sp. X251-20 small subunit ribosomal RNA gene, partial sequence.-
16-11930930 1.000- 0.000Cornuspira antarctica 18S ribosomal RNA gene, partial sequence.-
17-2288503673785 0.313- 0.000Nonionella labradorica isolate 3600 small subunit ribosomal RNA gene, complete sequence.
18-3312711388 0.944- 0.000Miliolidae sp. DL-2007 RNA polymerase II largest subunit (RPB1) gene, partial cds.-
19-22469516 0.954- 0.000Neogloboquadrina pachyderma isolate LB568 small subunit ribosomal RNA gene, partial sequence.-
20-1511621192 0.989- 0.000Globorotalia menardii gene for 18S rRNA, partial sequence, isolate: OKI_1.-
21-3119661003 0.972- 0.000G.bulloides DNA for 18S ribosomal RNA.-
22-1135923592 1.000- 0.000Globorotalia hirsuta isolate B8 clone 2 small subunit ribosomal RNA gene, complete sequence.-
23-7710791554 0.855- 0.000Bulimina marginata RNA polymerase II largest subunit (RPB1) gene, partial cds.
24-2139871154 0.952- 0.000Neogloboquadrina pachyderma isolate 12-5 small subunit ribosomal RNA gene, partial sequence.-
25-177031196 0.903- 0.000Turborotalita quinqueloba isolate 2-3-6 small subunit ribosomal RNA gene, partial sequence.-
26-15676999 0.858- 0.000Globigerina falconensis small subunit ribosomal RNA gene, partial sequence.-
27-2217481807 0.984- 0.000R.vilardeboana gene for 28S ribosomal RNA.-
28-13810601206 0.934- 0.000Globorotalia truncatulinoides gene for 18S rRNA, partial sequence, isolate: GUA_2_1.-
29-133847976 0.953- 0.000Globorotalia truncatulinoides 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), clone Vf4_1.-
30-131748898 0.968- 0.000Globorotalia truncatulinoides 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), clone Ag330_21.-
31-11517517 1.000- 0.000Globorotalia truncatulinoides isolate P115 clone 03 small subunit ribosomal RNA gene, partial sequence.-
32-12210071161 0.965- 0.000Hastigerina pelagica gene for 18S rRNA, partial sequence, isolate: OKI_2_1.-
33-1277001001 0.912- 0.000Hastigerina pelagica isolate R025 clone 09 small subunit ribosomal RNA gene, partial sequence.-
34-13296311 0.969- 0.000Hastigerina pelagica isolate 0843 clone 00 small subunit ribosomal RNA gene, partial sequence.-
35-8464061499 0.451- 0.000G.mediterranensis gene for 28S ribosomal RNA.
36-331861923 0.952- 0.000Angulodiscrobis quadrangularis small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.-
37-1111501150 1.000- 0.000Planoglabratella opercularis tuba3 mRNA for alpha-tubulin, partial cds.-
38-1111771177 1.000- 0.000Planoglabratella opercularis tubb2 mRNA for beta-tubulin, partial cds.-
39-1110571057 1.000- 0.000Planoglabratella opercularis EFL mRNA for translation elongation factor-like protein, partial cds.-
40-1310381044 0.996- 0.000Tretomphalus sp. B123 clone nTRE31 actin deviating protein gene, partial cds.-
41-1110171017 1.000- 0.000Tretomphalus sp. B123 clone TRE6 actin deviating protein gene, partial cds.-
42-1110971097 1.000- 0.000Discorbis rosea isolate 753.2 small subunit ribosomal RNA gene, partial sequence.-
43-3310221107 0.963- 0.000Planorbulina mediterranensis isolate 142.27 small subunit ribosomal RNA gene, partial sequence.-
44-1133413341 1.000- 0.000Rosalina macropora isolate F329 small subunit ribosomal RNA gene, complete sequence.-
45-1210461046 1.000- 0.000Haynesina germanica clone HY_44t actin deviating protein gene, partial cds.-
46-914393495 0.909- 0.000Heterostegina depressa partial 28S rRNA gene, isolate 282.
47-9148681439 0.869- 0.000Chlorarachnion CCMP240 16S ribosomal RNA gene, chloroplast gene for chloroplast RNA, complete sequence.
48-11560560 1.000- 0.000Nonionella stella isolate Nschl2a 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product.-
49-1110151015 1.000- 0.000Melonis barleeanum small subunit ribosomal RNA gene, partial sequence.-
50-233811031410 0.864- 0.000Nonionella labradorica isolate 4836 small subunit ribosomal RNA gene, partial sequence.
51-4171364635 0.643- 0.000A.beccarii LSU rRNA gene (clone DEB5).
52-2228643015 0.975- 0.000Ammonia sp. JP-2007 small subunit ribosomal RNA gene, complete sequence.-
53-4179561050 0.965- 0.000Ammonia tepida clone Z14 5 small subunit ribosomal RNA gene, partial sequence.
54-321520573 0.962- 0.000Ammonia sp. SSU rRNA gene, isolate TrS 1.-
55-1115881588 1.000- 0.000A.tepida gene for 28S ribosomal RNA.-
56-1111841184 1.000- 0.000Ammonia tepida clone A4 alpha tubulin gene, partial cds.-
57-13373599 0.749- 0.000A.parkinsoniana LSU rRNA gene (clone AMM2).-
58-11481481 1.000- 0.000A.parkinsoniana SSU rRNA gene, isolate Amm p 2.-
59-1111061106 1.000- 0.000Ammonia sp. mRNA for actin deviating protein.-
60-1147314731 1.000- 0.000R.elatiana complete gene of large subunit rRNA.-
61-11514514 1.000- 0.000Neorotalia calcar SSU rRNA gene, isolate 251.-
62-11383383 1.000- 0.000Cibicides refulgens partial 18S rRNA gene, isolate PS247.-
63-11892892 1.000- 0.000Cibicides refulgens isolate 2068 small subunit ribosomal RNA gene, complete sequence.-
64-644923994 0.955- 0.000Bulimina sp. BMK002 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
65-11868868 1.000- 0.000Uvigerina mediterranea clone M78-F4-20 small subunit ribosomal RNA gene, partial sequence.-
66-12210031103 0.970- 0.000Uvigerina peregrina isolate U194-1b 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
67-4249581033 0.963- 0.000Chilostomella ovoidea clone J59-16 small subunit ribosomal RNA gene, partial sequence.
68-22959990 0.984- 0.000Bulimina marginata clone BuA538_31 actin deviating protein gene, partial cds.-
69-1112201220 1.000- 0.000Bolivina sp. isolate 615 clone BO21 actin deviating protein gene, partial cds.-
70-1111451145 1.000- 0.000Bolivina sp. isolate 615 clone BO22 actin deviating protein gene, partial cds.-
71-1111661166 1.000- 0.000Bolivina sp. isolate 615 clone BO42 actin deviating protein gene, partial cds.-
72-1115111511 1.000- 0.000Globobulimina turgida RNA polymerase II largest subunit (RPB1) gene, partial cds.-
73-1140384038 1.000- 0.000Globobulimina turgida isolate 3601 small subunit ribosomal RNA gene, complete sequence.-
74-22846858 0.993- 0.000Buliminella sp. 5096 small subunit ribosomal RNA gene, complete sequence.-
75-12510511 0.999- 0.000Crithionina delacai partial 18S rRNA gene, isolate 1026.-
76-14313313 1.000- 0.000Crithionina mamilla partial 18S rRNA gene, isolate A51.-
77-2829267288 0.969- 0.000Psammosphaera sp. 1090 partial 18S rRNA gene, isolate 1090.
78-146806978 0.963- 0.000Virgulinella fragilis clone 615-67 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
79-21299441009 0.990- 0.000Epistominella exigua isolate S3623 clone 27 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
80-2628440712 0.793- 0.000Margaritella sp. 28S rRNA gene.
81-23321349 0.947- 0.000Notodendrodes antarkticos partial 18S rRNA gene, isolate 340.-
82-1111851185 1.000- 0.000Foraminiferan sp. 347 partial 18S rRNA gene, isolate 347.-
83-11856856 1.000- 0.000Foraminiferan sp. A109 partial 18S rRNA gene, isolate A109.-
84-1130423042 1.000- 0.000Allogromia sp. 18S rRNA gene.-
85-91311041616 0.785- 0.000R.filosa mRNA for alpha-tubulin, clone a111.
86-1115091509 1.000- 0.000R.filosa mRNA for beta-tubulin, clone b131.-
87-1116241624 1.000- 0.000R.filosa mRNA for gamma-tubulin.-
88-1115231523 1.000- 0.000Reticulomyxa filosa mRNA for alpha-tubulin 3.-
89-1133473347 1.000- 0.000Reticulomyxa filosa SSU rRNA gene, isolate 613.-
90-1110421042 1.000- 0.000Reticulomyxa filosa partial 18S rRNA gene, isolate 614.-
91-1112261226 1.000- 0.000Reticulomyxa filosa partial RPB1 gene for RNA polymerase II largest subunit.-
92-1113881388 1.000- 0.000Reticulomyxa filosa translation elongation factor 1A-like mRNA, partial cds.-
93-11904904 1.000- 0.000Reticulomyxa filosa translation elongation factor 1A-like protein gene, partial cds.-
94-12306306 1.000- 0.000Edaphoallogromia australica partial 18S rRNA gene, isolate 2266, 75.-
95-1414314361 0.904- 0.000Hippocrepinella sp. A335 partial 18S rRNA gene, isolate A335.
96-1127092709 1.000- 0.000Cribrothalammina alba 18S rRNA gene, isolate 226.-
97-11270270 1.000- 0.000Psammophaga sp. A302 partial 18S rRNA gene, isolate A302.-
98-33266266 1.000- 0.000Tinogullmia sp. A297 partial 18S rRNA gene, isolate A297.-
99-3413321444 0.972- 0.000Astrammina triangularis SSU rRNA gene (partial).-
100-29348378 0.937- 0.000Astrammina rara partial 18S rRNA gene, isolate A44.-
101-2240664140 0.991- 0.000Astrammina rara 18S rRNA gene, isolate 111.-
102-1112831283 1.000- 0.000Astrammina rara beta tubulin gene, complete sequence.-
103-44323326 0.995- 0.000Hemisphaerammina sp. 1084 partial 18S rRNA gene, isolate 1084.
104-22299303 0.993- 0.000Nemogullmia sp. 1186 partial 18S rRNA gene, isolate 1186.-
105-11411411 1.000- 0.000Nemogullmia sp. A308 partial 18S rRNA gene, isolate A308.-
106-11768768 1.000- 0.000Allogromida sp. Keys_Shepheardella small subunit ribosomal RNA gene, partial sequence.-
107-11788788 1.000- 0.000Allogromida sp. RnGsilversacc small subunit ribosomal RNA gene, partial sequence.-
108-22690698 0.994- 0.000Allogromida sp. rusty small subunit ribosomal RNA gene, partial sequence.-
109-22905922 0.991- 0.000Allogromida sp. duplin_quartzball small subunit ribosomal RNA gene, partial sequence.-
110-1111761176 1.000- 0.000Allogromida sp. white_encruster small subunit ribosomal RNA gene, partial sequence.-
111-12349349 1.000- 0.000Rhabdammina cornuta partial 18S rRNA gene, isolate A47.-
112-22290306 0.974- 0.000Pelosina sp. A74 partial 18S rRNA gene, isolate A74.-
113-1115031503 1.000- 0.000Bathysiphon flexilis RNA polymerase II largest subunit (RPB1) gene, partial cds.-
114-22889939 0.973- 0.000Vanhoeffenella sp. W37 partial 18S rRNA gene, isolate W37.-
115-1132133213 1.000- 0.000Rhizammina algaeformis small subunit ribosomal RNA gene, partial sequence.-
116-1140544054 1.000- 0.000Shinkaiya lindsayi small subunit ribosomal RNA gene, partial sequence.-
117-4045666853026 0.539- 0.000Plasmodiophora brassicae small subunit ribosomal RNA gene.
118-13622622 1.000- 0.000Haplosporidium louisiana clone 5 actin gene, partial cds.-
119-11945945 1.000- 0.000Haplosporidium louisiana clone 11 actin gene, partial cds.-
120-11622622 1.000- 0.000Urosporidium crescens actin gene, partial cds.-
121-11498498 1.000- 0.000Bonamia ostreae 18S ribosomal RNA gene, and internal transcribed spacer 1, partial sequence.-
122-16784869 0.951- 0.000Bonamia ostreae partial act gene for actin, clone BoAct1-2.-
123-17496514 0.982- 0.000Bonamia ostreae clone 1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.-
124-11207207 1.000- 0.000Bonamia sp. IA-2004 internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence.-
125-66247304 0.962- 0.000Bonamia sp. Ca Base 22 121504B.22 small subunit ribosomal RNA gene, partial sequence.
126-563340715 0.709- 0.000Bonamia sp. ex Ostrea stentina clone C small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.
127-28107176 0.951- 0.000Bonamia sp. ex Ostrea angasi clone 4 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence.-
128-11149149 1.000- 0.000Bonamia exitiosa clone ITA-2 small subunit ribosomal RNA gene, partial sequence.-
129-121490496 0.991- 0.000Bonamia perspora clone 17 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.-
130-129545549 0.998- 0.000Bonamia sp. ex Ostrea chilensis clone 26 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.-
131-1115071507 1.000- 0.000G.oviformis 5' terminal fragment of the LSU rRNA gene.-
132-1112561256 1.000- 0.000Gromia oviformis partial RPB1 gene for RNA polymerase II largest subunit.-
133-1121282128 1.000- 0.000Gromia oviformis actin gene, partial cds.-
134-1110281028 1.000- 0.000Gromia oviformis polyubiquitin gene, partial cds.-
135-1111591159 1.000- 0.000Haplosporidian parasite of Pandalus platyceros actin gene, partial cds.-
136-23869869 1.000- 0.000Collozoum inerme isolate 2 actin (ACT) gene, partial cds.-
137-11210210 1.000- 0.000Arthracanthida sp. DDM-2005 polyubiquitin (UBQ) gene, partial cds.-
138-1127472747 1.000- 0.000Pterocorys cf. zancleus I genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, strain: I.-
139-2212361569 0.894- 0.000Chlorarachnion reptans mitochondrial COXI gene for cytochrome c oxidase subunit I, partial cds.-
140-11273273 1.000- 0.000Chlorarachnion reptans mitochondrial COXII gene for cytochrome c oxidase subunit II, partial cds.-
141-3311621239 0.974- 0.000Gymnochlora stellata photosystem II oxygen evolving enhancer protein 1 mRNA, complete cds.-
142-1112081208 1.000- 0.000Chlorarachnion reptans ribulose bisphosphate carboxylase (rbcL) gene, chloroplast gene encoding chloroplast protein, partial cds.-
143-11549549 1.000- 0.000Chlorarachnion reptans partial vppIa gene for proton-translocating inorganic pyrophosphatase Ia.-
144-11615615 1.000- 0.000Chlorarachnion reptans partial vppIIa gene for proton-translocating inorganic pyrophosphatase IIa.-
145-11654654 1.000- 0.000Chlorarachnion reptans partial vppIIb gene for proton-translocating inorganic pyrophosphatase IIb.-
146-11706706 1.000- 0.000Chlorarachnion reptans partial vppIb gene for proton-translocating inorganic pyrophosphatase Ib, exons 1-2.-
147-242618413618 0.876- 0.000Cercozoa sp. YPF501 gene for nuclear large subunit ribosomal RNA, partial sequence.
148-1213861484 0.967- 0.000Chlorarachnion reptans translation elongation factor 1A-like mRNA, partial cds.-
149-11497497 1.000- 0.000Chlorarachnion reptans translation elongation factor 1A-like cytosolic A mRNA, partial cds.-
150-3415241651 0.958- 0.000Chlorarachnion reptans translation elongation factor 1A-like cytosolic B mRNA, partial cds.-
151-110490564 0.954- 0.000Chlorarachnion reptans culture-collection NIES:624 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence; nucleomorph.-
152-11827827 1.000- 0.000Chlorarachnion reptans strain NIES 624 culture-collection NIES:624 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence.-
153-11415415 1.000- 0.000Chlorarachnion reptans strain NIES 1408 culture-collection NIES:1408 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.-
154-11390390 1.000- 0.000Chlorarachnion reptans strain CCMP 238 assimilatory nitrate reductase (NR) gene, partial cds.-
155-1110901090 1.000- 0.000Gymnochlora stellata chloroplast EF-Tu gene, partial cds.-
156-1113941394 1.000- 0.000Gymnochlora stellata partial RPB1 gene for RNA polymerase II largest subunit, exons 1-3.-
157-11746746 1.000- 0.000Gymnochlora stellata strain RCC626 photosystem II protein D1 (psbA) gene, partial cds; chloroplast.-
158-11869869 1.000- 0.000Gymnochlora stellata translation initiation factor 1 mRNA, complete cds.-
159-1120522052 1.000- 0.000Gymnochlora stellata translation elongation factor 1A-like mRNA, complete cds.-
160-2216751703 0.992- 0.000Lotharella amoeboformis translation elongation factor 1A-like mRNA, complete cds.-
161-11752752 1.000- 0.000Gymnochlora stellata 40S ribosomal protein S9 mRNA, complete cds.-
162-11529529 1.000- 0.000Gymnochlora stellata 60S ribosomal protein L34 mRNA, complete cds.-
163-11594594 1.000- 0.000Gymnochlora stellata histone H4 mRNA, complete cds.-
164-11818818 1.000- 0.000Gymnochlora stellata phosphoglycerate mutase mRNA, complete cds.-
165-1111561156 1.000- 0.000Gymnochlora stellata glycine-rich nucleic acid binding protein mRNA, complete cds.-
166-11691691 1.000- 0.000Gymnochlora stellata Ras-related small GTPase Rab5 mRNA, complete cds.-
167-11551551 1.000- 0.000Gymnochlora stellata citrate synthetase mRNA, partial cds.-
168-1113301330 1.000- 0.000Gymnochlora stellata putative heat shock transcription factor mRNA, complete cds.-
169-22718952 0.877- 0.000Gymnochlora stellata Ras-related small GTPase Rab2 mRNA, complete cds.-
170-11534534 1.000- 0.000Gymnochlora stellata ubiquitin-conjugating enzyme 2 mRNA, complete cds.-
171-11898898 1.000- 0.000Gymnochlora stellata 60S ribosomal protein L17 mRNA, complete cds.-
172-11679679 1.000- 0.000Gymnochlora stellata calcineurin B subunit mRNA, complete cds.-
173-11830830 1.000- 0.000Gymnochlora stellata acetyl-CoA acyltransferase mRNA, partial cds.-
174-11518518 1.000- 0.000Gymnochlora stellata dynein light chain mRNA, complete cds.-
175-11574574 1.000- 0.000Gymnochlora stellata 60S ribosomal protein L37a mRNA, partial cds.-
176-11878878 1.000- 0.000Gymnochlora stellata proteasome alpha 4 subunit mRNA, complete cds.-
177-11874874 1.000- 0.000Gymnochlora stellata proteasome alpha 5 subunit mRNA, complete cds.-
178-11614614 1.000- 0.000Gymnochlora stellata actin depolymerizing factor mRNA, complete cds.-
179-11650650 1.000- 0.000Gymnochlora stellata ubiquitin-conjugating enzyme 1 mRNA, partial cds.-
180-11559559 1.000- 0.000Gymnochlora stellata multiprotein bridging factor type 1 mRNA, complete cds.-
181-11605605 1.000- 0.000Gymnochlora stellata putative oxidoreductase, 20G-Fe(II) oxygenase family mRNA, partial cds.-
182-11619619 1.000- 0.000Gymnochlora stellata cytosolic glutaredoxin mRNA, complete cds.-
183-11723723 1.000- 0.000Gymnochlora stellata calcium/calmodulin dependent protein kinase mRNA, partial cds.-
184-11923923 1.000- 0.000Gymnochlora stellata transketolase mRNA, complete cds.-
185-1111361136 1.000- 0.000Gymnochlora stellata putative SNF4 kinase-activating protein mRNA, complete cds.-
186-12890890 1.000- 0.000Gymnochlora stellata Rab1A1 mRNA, complete cds.-
187-12741741 1.000- 0.000Gymnochlora stellata RAB1-like mRNA, complete cds.-
188-11725725 1.000- 0.000Gymnochlora stellata chloroplast thioredoxin F-type mRNA, complete cds; nuclear gene for chloroplast product.-
189-11823823 1.000- 0.000Gymnochlora stellata cysteine dioxygenase mRNA, complete cds.-
190-1113171317 1.000- 0.000Gymnochlora stellata chloroplast sedoheptulose-1,7-bisphosphatase mRNA, partial cds; nuclear gene for chloroplast product.-
191-11948948 1.000- 0.000Gymnochlora stellata 50S ribosomal protein 36 mRNA, complete cds.-
192-11791791 1.000- 0.000Gymnochlora stellata ribulose bisphosphate carboxylase/oxygenase small subunit 1 mRNA, complete cds.-
193-11736736 1.000- 0.000Gymnochlora stellata photosystem II protein PSII10 mRNA, complete cds.-
194-11632632 1.000- 0.000Gymnochlora stellata photosystem II reaction center W protein mRNA, complete cds.-
195-11911911 1.000- 0.000Gymnochlora stellata photosystem II oxygen evolving enhancer protein 2 mRNA, partial cds.-
196-11672672 1.000- 0.000Gymnochlora stellata photosystem I reaction center subunit IV mRNA, complete cds.-
197-1117371737 1.000- 0.000Gymnochlora stellata photosystem I reaction center subunit II mRNA, complete cds.-
198-1112191219 1.000- 0.000Gymnochlora stellata phosphoglycerate kinase 1 mRNA, complete cds.-
199-11883883 1.000- 0.000Gymnochlora stellata chlorophyll a/b binding protein LI818 mRNA, complete cds.-
200-11787787 1.000- 0.000Gymnochlora stellata photosystem II oxygen evolving enhancer protein 3 mRNA, complete cds.-
201-11797797 1.000- 0.000Gymnochlora stellata light harvesting complex protein LHCII-2 mRNA, complete cds.-
202-1110511051 1.000- 0.000Gymnochlora stellata light harvesting complex protein LHCII-3 mRNA, complete cds.-
203-2411281284 0.947- 0.000Gymnochlora stellata light harvesting complex protein LHCII-1 mRNA, complete cds.-
204-1113451345 1.000- 0.000Gymnochlora stellata chloroplast light-dependent protochlorophyllide reductase mRNA, complete cds; nuclear gene for chloroplast product.-
205-11641641 1.000- 0.000Gymnochlora stellata chloroplast glutaredoxin mRNA, partial cds; nuclear gene for chloroplast product.-
206-11622622 1.000- 0.000Gymnochlora stellata cytochrome C6 precursor, mRNA, complete cds.-
207-2215341609 0.977- 0.000Gymnochlora stellata plastid targeted class I fructose-1,6-bisphosphate aldolase mRNA, complete cds; nuclear gene for plastid product.-
208-1110101010 1.000- 0.000Gymnochlora stellata cytochrome b6-f complex iron-sulfur subunit mRNA, complete cds.-
209-1110591059 1.000- 0.000Gymnochlora stellata putative thylakoid lumen protein mRNA, complete cds.-
210-1110831083 1.000- 0.000Gymnochlora stellata chlorophyll a/b binding protein CP29 mRNA, complete cds.-
211-1110621062 1.000- 0.000Gymnochlora stellata chloroplast ascorbate peroxidase 4 mRNA, complete cds; nuclear gene for chloroplast product.-
212-1111191119 1.000- 0.000Gymnochlora stellata mRNA splicing factor U5 snRNP mRNA, partial cds; nucleomorph.-
213-11769769 1.000- 0.000Gymnochlora stellata mRNA splicing factor U2 associated factor mRNA, partial cds; nucleomorph.-
214-11575575 1.000- 0.000Gymnochlora stellata TATA binding protein of TFIID mRNA, partial cds; nucleomorph.-
215-11465465 1.000- 0.000Gymnochlora stellata transcription initiation factor IIa gamma subunit mRNA, partial cds; nucleomorph.-
216-11551551 1.000- 0.000Gymnochlora stellata 40S ribosomal protein S23 mRNA, partial cds; nucleomorph.-
217-11417417 1.000- 0.000Gymnochlora stellata 40S ribosomal protein S11 mRNA, partial cds; nucleomorph.-
218-11781781 1.000- 0.000Gymnochlora stellata 40S ribosomal protein S9 mRNA, partial cds; nucleomorph.-
219-11630630 1.000- 0.000Gymnochlora stellata 40S ribosomal protein S7 mRNA, complete cds; nucleomorph.-
220-11541541 1.000- 0.000Gymnochlora stellata 40S ribosomal protein S5 mRNA, complete cds; nucleomorph.-
221-11863863 1.000- 0.000Gymnochlora stellata 40S ribosomal protein S3 mRNA, complete cds; nucleomorph.-
222-11807807 1.000- 0.000Gymnochlora stellata 60S ribosomal protein L10 mRNA, partial cds; nucleomorph.-
223-11802802 1.000- 0.000Gymnochlora stellata DNA-directed RNA polymerase I mRNA, partial cds; nucleomorph.-
224-1112701270 1.000- 0.000Gymnochlora stellata Ras-related small GTPase RAN mRNA, partial cds; nucleomorph.-
225-1115361536 1.000- 0.000Gymnochlora stellata spliceosome dissassembly protein PRP43 (prp43-1) mRNA, partial cds; nucleomorph.-
226-1117131713 1.000- 0.000Gymnochlora stellata myb domain containing transcription regulator (myb) mRNA, partial cds; nucleomorph.-
227-11940940 1.000- 0.000Gymnochlora stellata mRNA splicing factor 3bA mRNA, complete cds; nucleomorph.-
228-11968968 1.000- 0.000Gymnochlora stellata chloroplast inner chloroplast membrane translocon Tic20 (tic20) mRNA, complete cds; nucleomorph gene for chloroplast product.-
229-11916916 1.000- 0.000Gymnochlora stellata thylakoid protein translocator TatC (tatC) mRNA, complete cds; nucleomorph gene for chloroplast product.-
230-1117301730 1.000- 0.000Gymnochlora stellata chloroplast iron sulfur assembly protein SufB (sufB) mRNA, complete cds; nucleomorph gene for chloroplast product.-
231-11893893 1.000- 0.000Gymnochlora stellata chloroplast ATP-dependent Clp protease proteolytic subunit 5 (clpP-5) mRNA, complete cds; nucleomorph gene for chloroplast product.-
232-11817817 1.000- 0.000Gymnochlora stellata chloroplast ATP-dependent Clp protease proteolytic subunit 6 (clpP-6) mRNA, complete cds; nucleomorph gene for chloroplast product.-
233-11637637 1.000- 0.000Gymnochlora stellata chloroplast ATP-dependent Clp protease proteolytic subunit 4 (clpP-4) mRNA, complete cds; nucleomorph gene for chloroplast product.-
234-11799799 1.000- 0.000Gymnochlora stellata chloroplast ATP-dependent Clp protease proteolytic subunit 2 (clpP-2) mRNA, complete cds; nucleomorph gene for chloroplast product.-
235-11768768 1.000- 0.000Gymnochlora stellata chloroplast ATP-dependent Clp protease proteolytic subunit 3 (clpP-3) mRNA, complete cds; nucleomorph gene for chloroplast product.-
236-11577577 1.000- 0.000Gymnochlora stellata Rab1A2 mRNA, partial cds.-
237-11729729 1.000- 0.000Gymnochlora stellata Rab1B mRNA, complete cds.-
238-127401032 0.859- 0.000Gymnochlora stellata strain CCMP 2057 culture-collection CCMP:2057 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence.-
239-23586663 0.956- 0.000Gymnochlora stellata culture-collection RCC:626 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence; nucleomorph.-
240-2316242328 0.862- 0.000Lotharella vacuolata translation elongation factor 1A-like protein gene, partial cds.-
241-1213861751 0.896- 0.000Lotharella vacuolata translation elongation factor 1A-like cytosolic A mRNA, complete cds.-
242-3316701739 0.984- 0.000Lotharella globosa translation elongation factor 1A-like mRNA, complete cds.-
243-11638638 1.000- 0.000Lotharella vacuolata culture-collection CCMP:240 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence; nucleomorph.-
244-12611612 0.999- 0.000Lotharella globosa ubiquitin/ribosomal protein P1 fusion 1 gene, partial cds.-
245-13601606 0.997- 0.000Lotharella globosa culture-collection CCCM:811 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence; nucleomorph.-
246-1113411341 1.000- 0.000Lotharella globosa strain CCCM 811 culture-collection CCCM:811 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence.-
247-1117341734 1.000- 0.000Chlorarachnion sp. CCMP238 mitochondrial coxII, coxI genes for cytochrome b oxidase subunit II, cytochrome b oxidase subunit I, partial cds.-
248-1113751375 1.000- 0.000Lotharella amoeboformis translation elongation factor 1A-like mRNA, partial cds.-
249-11945945 1.000- 0.000Lotharella amoeboformis chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 3 (rbcS3) gene, 3' UTR; nuclear gene for chloroplast product.-
250-1111771177 1.000- 0.000Lotharella amoeboformis chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1 (rbcS1) gene, partial cds; nuclear gene for chloroplast product.-
251-12794815 0.987- 0.000Lotharella amoeboformis chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 2 mRNA, complete cds; nuclear gene for chloroplast product.-
252-11967967 1.000- 0.000Lotharella amoeboformis chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1 mRNA, complete cds; nuclear gene for chloroplast product.-
253-1113561356 1.000- 0.000Lotharella amoeboformis calreticulin mRNA, complete cds.-
254-11668668 1.000- 0.000Lotharella amoeboformis culture-collection CCMP:2058 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence; nucleomorph.-
255-11549549 1.000- 0.000Chlorarachnion sp. RCC435 18S ribosomal RNA gene, partial sequence.-
256-11549549 1.000- 0.000Chlorarachnion sp. RCC435 18S ribosomal RNA gene, partial sequence; nucleomorph.-
257-215488547 0.958- 0.000Bigelowiella longifila culture-collection CCMP:1486 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence; nucleomorph.-
258-14494610 0.906- 0.000Bigelowiella longifila strain CCMP 1481 culture-collection CCMP:1481 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.-
259-8138411302 0.805- 0.000Cercomonas ATCC50316 beta-tubulin (btub) gene, partial cds.
260-11326326 1.000- 0.000Plasmodiophora brassicae mRNA expressed in the host plant, partial cds.-
261-1125481385 0.616- 0.000P.brassicae partial 18S rRNA gene, 5.8S rRNA gene and two internal transcribed spacers.-
262-1152405240 1.000- 0.000Plasmodiophora brassicae PbSTKL1 gene for serine/threonine kinase-like protein, complete cds.-
263-11573573 1.000- 0.000Plasmodiophora brassicae clone Brip9 unknown mRNA.-
264-11588588 1.000- 0.000Plasmodiophora brassicae Ypt-like mRNA, partial sequence.-
265-1118831883 1.000- 0.000Plasmodiophora brassicae repetitive fragment H4, complete sequence.-
266-1124702470 1.000- 0.000Plasmodiophora brassicae repetitive fragment E56, complete sequence.-
267-12117175 0.834- 0.000Plasmodiophora brassicae trehalose-6-phosphate synthase gene, partial cds.-
268-1210121033 0.990- 0.000Plasmodiophora brassicae internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.-
269-1110051005 1.000- 0.000Plasmodiophora brassicae genomic sequence.-
270-1119671967 1.000- 0.000Plasmodiophora brassicae clone Tsu_19 unknown mRNA sequence.-
271-11483483 1.000- 0.000Plasmodiophora brassicae small subunit ribosomal RNA gene, partial sequence.-
272-11558558 1.000- 0.000Plasmodiophora brassicae 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product.-
273-11486486 1.000- 0.000Plasmodiophora brassicae 23S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product.-
274-11399399 1.000- 0.000Plasmodiophora brassicae internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence.-
275-11662662 1.000- 0.000Plasmodiophora brassicae repetitive element E7 sequence.-
276-1112101210 1.000- 0.000Plasmodiophora brassicae H78 fragment unknown mitochondrial sequence.-
277-11298298 1.000- 0.000Plasmodiophora brassicae S17 ribosomal protein mRNA, partial cds.-
278-11180180 1.000- 0.000Plasmodiophora brassicae mRNA expressed during secondary infection, clone CC240.-
279-11402402 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbURM.-
280-11737737 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbCALUP.-
281-11518518 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbCAL.-
282-1121162116 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbENDO.-
283-1214531847 0.893- 0.000Plasmodiophora brassicae serine protease Pro1 gene, complete cds.-
284-11755755 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbCHAP.-
285-11880880 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbL7a.-
286-11974974 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbGTPX.-
287-11508508 1.000- 0.000Plasmodiophora brassicae ORF1 DNA for hypothetical protein, clone PbGSTUP.-
288-1226644006 0.833- 0.000Plasmodiophora brassicae partial partial OtsA gene for trehalose-6-phosphate synthase, clone PbT6PS.-
289-1120972097 1.000- 0.000Plasmodiophora brassicae actII gene for actin II, clone PbACTII.-
290-1137343734 1.000- 0.000Plasmodiophora brassicae partial ORF1 and actI gene for actin I, clone PbURM.-
291-1129502950 1.000- 0.000Plasmodiophora brassicae beta tub gene for beta tubulin, clone PbBTUB.-
292-1163116311 1.000- 0.000Plasmodiophora brassicae ORF1, ORF2, ORF3 and ORF4 DNA for hypothetical proteins, clone calup/cal/endo/peps28.-
293-1140004000 1.000- 0.000Plasmodiophora brassicae partial ORF1 and ORF2 DNA for hypothetical proteins, clone PbL7a/PbCHAP.-
294-11586586 1.000- 0.000Plasmodiophora brassicae partial ORF1 for hypothetical protein, clone PbsHSP1.-
295-1112131213 1.000- 0.000Plasmodiophora brassicae partial ORF1 DNA for hypothetical protein, clone PbsHSP2.-
296-11854854 1.000- 0.000Plasmodiophora brassicae partial ORF1 DNA for hypothetical protein, clone PbSUNK1.-
297-1123142314 1.000- 0.000Plasmodiophora brassicae partial ORF1 for hypothetical protein, clone PbSUNK2.-
298-11522522 1.000- 0.000Plasmodiophora brassicae partial ORF1 for hypothetical protein, clone PbCYCA.-
299-1114441444 1.000- 0.000Plasmodiophora brassicae ORF1 and ORF2 DNA for hypothetical proteins, clone PbGST1/PbGSTUP.-
300-1128952895 1.000- 0.000Plasmodiophora brassicae ORF1 and ORF2 for hypothetical proteins, clone PbGTPX/PbPDA1.-
301-1119891989 1.000- 0.000Plasmodiophora brassicae ORF1 for hypothetical protein, clone PbIDS.-
302-11728728 1.000- 0.000Plasmodiophora brassicae partial ORF1 for hypothetical protein, clone PbHISH4.-
303-1125022502 1.000- 0.000Plasmodiophora brassicae ORF1 for hypothetical protein, clone PbTPP.-
304-1146924692 1.000- 0.000Plasmodiophora brassicae ORF1 for hypothetical protein, clone PbPSA.-
305-1113751375 1.000- 0.000Plasmodiophora brassicae OF1 for hypothetical protein, clone PbMOB1.-
307-11104104 1.000- 0.000Plasmodiophora brassicae isolate Bisserup 18S ribosomal RNA gene, partial sequence.-
308-532258887 0.631- 0.000P.graminis partial 18S rRNA gene, 5.8S rRNA gene and two internal transcribed spacers, strain F51.
309-1217961821 0.993- 0.000Polymyxa betae keskin etaeBS2 gene for hypothetical protein.-
310-11634634 1.000- 0.000Polymyxa betae mRNA for glutathione-s-transferase, partial.-
311-1115021502 1.000- 0.000Polymyxa betae keskin EcoRI genomic DNA fragment, isolate NL1.-
312-1111921192 1.000- 0.000Polymyxa betae keskin RAPD-PCR amplified genomic DNA fragment.-
313-13482482 1.000- 0.000Polymyxa graminis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), isolate I9.-
314-11450450 1.000- 0.000Polymyxa graminis partial ORF1 DNA for hypothetical protein, clone pgII/3-9.-
315-11697697 1.000- 0.000Polymyxa graminis partial ORF1 DNA for hypothetical protein, clone pgIII/4-47.-
316-11367367 1.000- 0.000Polymyxa graminis ORF1 DNA for hypothetical protein, clone pgV/4-9.-
317-11496496 1.000- 0.000Polymyxa graminis ORF1 DNA for hypothetical protein, clone pgIX/3-10.-
318-12434434 1.000- 0.000Polymyxa graminis partial ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA gene, isolate Afr1.-
319-11511511 1.000- 0.000Polymyxa graminis partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA gene, isolate Garden.-
320-28530565 0.963- 0.000Spongospora subterranea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
321-11346346 1.000- 0.000Spongospora subterranea polyubiquitin 2 gene, partial cds.-
322-12508524 0.985- 0.000Spongospora subterranea f. sp. nasturtii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
323-22422426 0.995- 0.000Phagomyxa odontellae 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
324-11590590 1.000- 0.000Sorosphaera veronicae 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
325-11800800 1.000- 0.000Sorosphaera viticola internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.-
326-2215871986 0.899- 0.000Chlorarachniophyceae sp. CCMP1408 translation elongation factor 1A-like mRNA, partial cds.-
327-11729729 1.000- 0.000Norrisiella sphaerica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence; nucleomorph.-
328-1112171217 1.000- 0.000Norrisiella sphaerica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence.-
329-11655655 1.000- 0.000Partenskyella glossopodia culture-collection RCC:365 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and partial 28S ribosomal RNA gene, partial sequence; nucleomorph.-
330-16298298 1.000- 0.000Marteilia sydneyi isolate Georges River 18S ribosomal RNA gene and internal transcribed spacer 1, partial sequence.-
331-11475475 1.000- 0.000Marteilia refringens detection probe.-
332-1123022302 1.000- 0.000Marteilia refringens 18S rRNA gene.-
333-1134553455 1.000- 0.000Marteilia refringens partial 28S rRNA gene, IGS, and partial 18S rRNA gene.-
334-39159306412 0.909- 0.000Marteilia refringens clone G_Oy20.2 internal transcribed spacer 1, partial sequence.
335-137352525 0.973- 0.000Marteilia refringens partial intergenic spacer (IGS), clone MgaVen-3.-
336-122324359 0.988- 0.000Marteilia refringens partial intergenic spacer (IGS), isolated from the host Chamelea gallina.-
337-1611971744 0.891- 0.000Marteilioides chungmuensis gene for 18S rRNA.-
338-11754754 1.000- 0.000Cercomonas sp. ATCC 50318 actin-2 (act2) gene, partial cds.-
339-11869869 1.000- 0.000Cercomonas ATCC50318 actin-3 (act3) gene, partial cds.-
340-1117681768 1.000- 0.000Cercomonas sp. ATCC 50318 partial RPB1 gene for RNA polymerase II largest subunit, exons 1-6.-
341-1132583258 1.000- 0.000Cercomonas ATCC50319 RNA polymerase II largest subunit gene, partial cds.-
342-11942942 1.000- 0.000Cercomonas longicauda bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) gene, partial cds.-
343-2121577696 0.907- 0.000Cercomonas kiaerdammane strain NY12 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
344-11730730 1.000- 0.000Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
345-252611951334 0.963- 0.000Bodomorpha sp. HFCC92 28S ribosomal RNA gene, partial sequence.
346-44524550 0.981- 0.000Cercomonas gigantica strain NY1 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
347-11562562 1.000- 0.000Cercomonas clavideferens strain ATCC 50319 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
348-22569585 0.986- 0.000Cercomonas celer strain C-51 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
349-11620620 1.000- 0.000Cercomonas radiata strain xt134 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
350-739576661 0.987- 0.000Massisteria sp. diva strain HFCC385 18S ribosomal RNA gene and internal transcribed spacer 1, partial sequence.
351-1717195369 0.882- 0.000Eocercomonas sp. PT208-20 18S ribosomal RNA gene and internal transcribed spacer 1, partial sequence.
352-1117261726 1.000- 0.000Helkesimastix sp. ATCC 50328 18S ribosomal RNA gene, partial sequence.-
353-11619619 1.000- 0.000Cercomonas dactyloptera strain C-43 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
354-99537567 0.970- 0.000Paracercomonas compacta strain xt198 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
355-66196203 0.975- 0.000Paracercomonas sp. P111 internal transcribed spacer 1, partial sequence.
356-1616645667 0.980- 0.000Paracercomonas sp. DB-1002-6 18S ribosomal RNA gene and internal transcribed spacer 1, partial sequence.
357-33176181 0.987- 0.000Paracercomonas sp. Panama86 internal transcribed spacer 1, partial sequence.-
358-22188188 1.000- 0.000Paracercomonas sp. Panama61 internal transcribed spacer 1, partial sequence.-
359-22536561 0.978- 0.000Paracercomonas crassicauda strain ATCC 50316 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
360-55609662 0.941- 0.000Eocercomonas uvella strain 11-7E 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
361-11619619 1.000- 0.000Paracercomonas filosa strain 17-1F 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
362-11526526 1.000- 0.000Eocercomonas ramosa strain C-80 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
363-1224912694 0.962- 0.000Sainouron acronematica 18S ribosomal RNA gene, complete sequence.-
364-11578578 1.000- 0.000Cavernomonas mira strain Cav-A 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
365-11572572 1.000- 0.000Paracercomonas elongata strain IVY11 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
366-11667667 1.000- 0.000Paracercomonas virgaria strain C-71 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
367-11539539 1.000- 0.000Paracercomonas anaerobica strain ATCC 50367 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
368-1818683731 0.963- 0.000Cercozoa sp. WA60ap124at20LS 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
369-11794794 1.000- 0.000Cercozoa sp. BSP1 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
370-33751776 0.985- 0.000Cercozoa sp. Hf_SH1_KV 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.-
371-1111351135 1.000- 0.000Arachnula sp. ATCC 50593 alpha-tubulin gene, partial cds.-
372-1112271227 1.000- 0.000Euglypha rotunda mitochondrial COXI gene for cytochrome c oxidase subunit I, partial cds.-
373-1228444934 0.788- 0.000Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880.-
374-1118591859 1.000- 0.000Paulinella chromatophora plastid partial CsoS1 gene, rbcL gene and partial rbcS gene, strain M0880.-
375-1142944294 1.000- 0.000Paulinella chromatophora photosystem II D1 protein (psbA), ABC transporter, hypothetical protein, and glutathione S-transferase (gstC) genes, complete cds; and hypothetical membrane protein gene, partial cds; cyanelle.-
376-1193989398 1.000- 0.000Paulinella chromatophora hypothetical protein, photosystem II manganese-stabilizing protein (psbO), ATP-sulfurylase (cysD), cell division protein (ftsH), KHG/KDPG aldolase (eda), chorismate synthase (aroC), and photosystem II D1 protein (psbA) genes, complete cds; and elongator protein 3 (nifB) gene, partial cds; cyanelle.-
377-1110101010 1.000- 0.000Paulinella chromatophora elongation factor EF-Tu (tufA) gene, partial cds; cyanelle.-
378-1188018801 1.000- 0.000Paulinella chromatophora carboxysome gene cluster, complete sequence; chloroplast.-
379-11854854 1.000- 0.000Paulinella chromatophora strain FK01 FtsZ (ftsZ) gene, partial cds.-
380-11765765 1.000- 0.000Paulinella chromatophora strain FK01 photosystem I reaction center subunit IV (psaE) mRNA, complete cds.-
381-1112571257 1.000- 0.000Paulinella chromatophora strain FK01 photosystem I reaction center subunit IV (psaE) gene, complete cds.-
382-23310320 0.979- 0.000Thaumatomonas seravini strain HFCC58 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence.-
383-1111191119 1.000- 0.000Thaumatomonas seravini alpha-tubulin (atub) gene, partial cds.-
384-2411411831 0.765- 0.000Thaumatomonas sp. (SA) heat shock protein 90 (Hsp90) gene, partial cds.-
385-1119921992 1.000- 0.000Thaumatomonas sp. TMT002 clone tseef2-25 eukaryotic translation elongation factor 2 gene, partial cds.-
386-11363363 1.000- 0.000Thaumatomonas sp. TMT002 clone tseef2-1 eukaryotic translation elongation factor 2 mRNA, partial cds.-
387-11692692 1.000- 0.000Thaumatomonas sp. TMT002 clone tshsp70-2 70 kDa heat shock protein gene, partial cds.-
388-11942942 1.000- 0.000Thaumatomonas sp. TMT002 clone tshsp70-1 70 kDa heat shock protein mRNA, partial cds.-

  1 Maximum Alignment Density
  2 "Q" alignment comparison score between default Clustal W and Muscle alignments
  3 Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
  4 Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


Back to taxonomic hierarchy view