|| Cluster set at subtree whose root is 'Oxymonadida'
| ||Click here to see taxon by cluster Data Availability Matrix|
|Cluster ID||Parent cluster||TaxIDs||GIs||Lmin||Lmax||MAD1||Q2||Tcfi3||Defline of longest sequence||Tree4|
|1||-||18||41||1886||2158|| 0.936||-|| 0.000||Oxymonas sp. NcOxA gene for small subunit ribosomal RNA, partial sequence.||
|4||-||6||25||897||1634|| 0.715||-|| 0.000||Monocercomonoides sp. PA clone 4/4 tubulin alpha subunit mRNA, complete cds.||
Maximum Alignment Density
"Q" alignment comparison score between default Clustal W and Muscle alignments
Level of resolution (consensus fork index) of the strict consensus tree built from the two bootstrap trees from Clustal W and Muscle alignments.
Trees are unrooted majority rule consensus trees from 'fast bootstrap parsimony' algorithm in PAUP* 4.0 using default ClustalW alignments. Expect performance to deteriorate with low MAD or Q scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.
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