Sequence diversity and cluster set summaries (rel. 176)

Sequence tallies include those from "model" organisms. To exclude model organisms, click here.
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Phylota TaxBrowser Mirror Table
NCBI taxon name1   Descendant species2 Descendant terminals Sequences (GIs) Seq. clusters3 Phylog. inform. seq. clusters4
Theobroma   up to Byttnerioideae 14 14 630 22 8
    Theobroma angustifolium
1 1 12 7 0
    Theobroma bicolor
1 1 14 10 0
    Theobroma cacao
1 1 486 349 0
    Theobroma chocoense
1 1 7 6 0
    Theobroma gileri
1 1 7 6 0
    Theobroma grandiflorum
1 1 16 9 0
    Theobroma mammosum
1 1 9 7 0
    Theobroma microcarpum
1 1 22 11 0
    Theobroma obovatum
1 1 6 2 0
    Theobroma simiarum
1 1 8 8 0
    Theobroma speciosum
1 1 13 10 0
    Theobroma subincanum
1 1 20 10 0
    Theobroma sylvestre
1 1 4 2 0
    Theobroma velutinum
1 1 6 6 0

   1Names refer to node and its subtree unless the term "node only" appears.
   2Taxa at species rank as determined by NCBI (including this node). Note that some of these have not been formally named yet and are not retrieved in certain NCBI Taxonomy searches (e.g., Marina sp. Lavin 5341), but they are associated with sequence(s) and are counted as species here.
   3Clusters built by exhaustive all-against-all BLAST searches. For further information of about this see here. A dash (-) means there were too many sequences to cluster or no sequences at all.
   4Phylogenetically informative clusters have four or more taxa (not GIs) represented.